RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 DCAF8L2P0C7V8 631 aa24.24■■□□□ 1.47
NUP98-203ENST00000359171 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
NUP98-203ENST00000359171 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
NUP98-203ENST00000359171 APLP2Q06481 763 aa22.63■■□□□ 1.21
NUP98-203ENST00000359171 EHMT2Q96KQ7 1210 aa22.62■■□□□ 1.21
NUP98-203ENST00000359171 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
NUP98-203ENST00000359171 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
NUP98-203ENST00000359171 ERICH6Q7L0X2 663 aa22.47■■□□□ 1.19
NUP98-203ENST00000359171 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
NUP98-203ENST00000359171 MYT1Q01538 1121 aa22.42■■□□□ 1.18
NUP98-203ENST00000359171 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
NUP98-203ENST00000359171 PCGF6Q9BYE7 350 aa22.35■■□□□ 1.17
NUP98-203ENST00000359171 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
NUP98-203ENST00000359171 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
NUP98-203ENST00000359171 TTBK1Q5TCY1 1321 aaPredicted RBP21.99■■□□□ 1.11
NUP98-203ENST00000359171 NEFLP07196 543 aa21.96■■□□□ 1.11
NUP98-203ENST00000359171 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
NUP98-203ENST00000359171 YTHDC1Q96MU7 727 aaKnown RBP21.68■■□□□ 1.06
NUP98-203ENST00000359171 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
NUP98-203ENST00000359171 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
NUP98-203ENST00000359171 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
NUP98-203ENST00000359171 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
NUP98-203ENST00000359171 TRIM26Q12899 539 aaPredicted RBP21.37■■□□□ 1.01
NUP98-203ENST00000359171 HRCP23327 699 aa21.36■■□□□ 1.01
NUP98-203ENST00000359171 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
NUP98-203ENST00000359171 RTL5Q5HYW3 569 aaPredicted RBP21.04■□□□□ 0.96
NUP98-203ENST00000359171 POLR3GLQ9BT43 218 aa20.9■□□□□ 0.94
NUP98-203ENST00000359171 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
NUP98-203ENST00000359171 ITGAEP38570 1179 aa20.84■□□□□ 0.93
NUP98-203ENST00000359171 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
NUP98-203ENST00000359171 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
NUP98-203ENST00000359171 CLSPNQ9HAW4 1339 aa20.72■□□□□ 0.91
NUP98-203ENST00000359171 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
NUP98-203ENST00000359171 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
NUP98-203ENST00000359171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.63■□□□□ 0.89
NUP98-203ENST00000359171 CNGB1Q14028 1251 aaPredicted RBP20.63■□□□□ 0.89
NUP98-203ENST00000359171 MYT1LQ9UL68 1186 aa20.6■□□□□ 0.89
NUP98-203ENST00000359171 GTF3C3Q9Y5Q9 886 aa20.55■□□□□ 0.88
NUP98-203ENST00000359171 CDK11AQ9UQ88 783 aaPredicted RBP20.5■□□□□ 0.87
NUP98-203ENST00000359171 BCANQ96GW7 911 aa20.43■□□□□ 0.86
NUP98-203ENST00000359171 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
NUP98-203ENST00000359171 ANP32CO43423 234 aa20.37■□□□□ 0.85
NUP98-203ENST00000359171 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
NUP98-203ENST00000359171 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.83
NUP98-203ENST00000359171 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
NUP98-203ENST00000359171 TRIM52Q96A61 297 aa20.25■□□□□ 0.83
NUP98-203ENST00000359171 NEUROD1Q13562 356 aa20.22■□□□□ 0.83
NUP98-203ENST00000359171 ANP32AP39687 249 aaKnown RBP20.21■□□□□ 0.83
NUP98-203ENST00000359171 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
NUP98-203ENST00000359171 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
NUP98-203ENST00000359171 EIF5BO60841 1220 aaKnown RBP20.01■□□□□ 0.79
NUP98-203ENST00000359171 ANP32BQ92688 251 aaKnown RBP19.98■□□□□ 0.79
NUP98-203ENST00000359171 GLIPR1L2Q4G1C9 344 aa19.97■□□□□ 0.79
NUP98-203ENST00000359171 NEFMP07197 916 aa19.94■□□□□ 0.78
NUP98-203ENST00000359171 NPM2Q86SE8 214 aaKnown RBP19.92■□□□□ 0.78
NUP98-203ENST00000359171 FKBP8Q14318 412 aa19.86■□□□□ 0.77
NUP98-203ENST00000359171 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
NUP98-203ENST00000359171 BCL11AQ9H165 835 aa19.8■□□□□ 0.76
NUP98-203ENST00000359171 HSP90AA1P07900 732 aaKnown RBP19.78■□□□□ 0.76
NUP98-203ENST00000359171 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
NUP98-203ENST00000359171 HNRNPUQ00839 825 aaKnown RBP eCLIP19.7■□□□□ 0.74
NUP98-203ENST00000359171 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
NUP98-203ENST00000359171 TONSLQ96HA7 1378 aa19.62■□□□□ 0.73
NUP98-203ENST00000359171 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
NUP98-203ENST00000359171 NBR1Q14596 966 aa19.58■□□□□ 0.72
NUP98-203ENST00000359171 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
NUP98-203ENST00000359171 FAM9BQ8IZU0 186 aa19.56■□□□□ 0.72
NUP98-203ENST00000359171 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
NUP98-203ENST00000359171 DCAF1Q9Y4B6 1507 aa19.47■□□□□ 0.71
NUP98-203ENST00000359171 P3H3Q8IVL6 736 aa19.46■□□□□ 0.71
NUP98-203ENST00000359171 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
NUP98-203ENST00000359171 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
NUP98-203ENST00000359171 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
NUP98-203ENST00000359171 ANP32EQ9BTT0 268 aa19.43■□□□□ 0.7
NUP98-203ENST00000359171 FBLN2P98095 1184 aa19.42■□□□□ 0.7
NUP98-203ENST00000359171 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
NUP98-203ENST00000359171 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.7
NUP98-203ENST00000359171 ARXQ96QS3 562 aa19.39■□□□□ 0.7
NUP98-203ENST00000359171 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
NUP98-203ENST00000359171 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
NUP98-203ENST00000359171 ARID3CA6NKF2 412 aa19.36■□□□□ 0.69
NUP98-203ENST00000359171 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
NUP98-203ENST00000359171 BECN1Q14457 450 aa19.34■□□□□ 0.69
NUP98-203ENST00000359171 TRIM44Q96DX7 344 aaPredicted RBP19.33■□□□□ 0.68
NUP98-203ENST00000359171 MIER1Q8N108 512 aa19.32■□□□□ 0.68
NUP98-203ENST00000359171 TNNT2P45379 298 aaPredicted RBP19.27■□□□□ 0.68
NUP98-203ENST00000359171 GOLGA6L22H0YM25 854 aa19.27■□□□□ 0.67
NUP98-203ENST00000359171 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
NUP98-203ENST00000359171 NCLP19338 710 aaKnown RBP19.24■□□□□ 0.67
NUP98-203ENST00000359171 IRX6P78412 446 aaPredicted RBP19.24■□□□□ 0.67
NUP98-203ENST00000359171 ERICH6BQ5W0A0 696 aa19.24■□□□□ 0.67
NUP98-203ENST00000359171 CHGAP10645 457 aaKnown RBP19.24■□□□□ 0.67
NUP98-203ENST00000359171 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
NUP98-203ENST00000359171 ESF1Q9H501 851 aaKnown RBP19.2■□□□□ 0.66
NUP98-203ENST00000359171 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
NUP98-203ENST00000359171 CDK11BP21127 795 aaKnown RBP19.18■□□□□ 0.66
NUP98-203ENST00000359171 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.66
NUP98-203ENST00000359171 ABCC9O60706 1549 aa19.13■□□□□ 0.65
NUP98-203ENST00000359171 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
NUP98-203ENST00000359171 PTMAP06454 111 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms