RNA–Protein interactions for RNA: ENST00000372683.1

RIMS3-201, Transcript of regulating synaptic membrane exocytosis 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMS3, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3-201ENST00000372683 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
RIMS3-201ENST00000372683 ABCC9O60706 1549 aa33.6■■■□□ 2.97
RIMS3-201ENST00000372683 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.91
RIMS3-201ENST00000372683 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
RIMS3-201ENST00000372683 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
RIMS3-201ENST00000372683 NACADO15069 1562 aa31.45■■■□□ 2.63
RIMS3-201ENST00000372683 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
RIMS3-201ENST00000372683 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
RIMS3-201ENST00000372683 UNC13AQ9UPW8 1703 aa31.09■■■□□ 2.57
RIMS3-201ENST00000372683 BICRAQ9NZM4 1560 aa30.88■■■□□ 2.53
RIMS3-201ENST00000372683 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
RIMS3-201ENST00000372683 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
RIMS3-201ENST00000372683 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
RIMS3-201ENST00000372683 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
RIMS3-201ENST00000372683 CECR2Q9BXF3 1484 aa30.31■■■□□ 2.44
RIMS3-201ENST00000372683 DCAF1Q9Y4B6 1507 aa30.3■■■□□ 2.44
RIMS3-201ENST00000372683 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
RIMS3-201ENST00000372683 EIF4G1Q04637 1599 aaKnown RBP30.17■■■□□ 2.42
RIMS3-201ENST00000372683 DNAJC5Q9H3Z4 198 aa29.56■■■□□ 2.32
RIMS3-201ENST00000372683 CUX2O14529 1486 aa29.15■■■□□ 2.26
RIMS3-201ENST00000372683 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
RIMS3-201ENST00000372683 NCAPD3P42695 1498 aa29■■■□□ 2.23
RIMS3-201ENST00000372683 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
RIMS3-201ENST00000372683 HMGXB3Q12766 1538 aa28.81■■■□□ 2.2
RIMS3-201ENST00000372683 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
RIMS3-201ENST00000372683 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
RIMS3-201ENST00000372683 NESP48681 1621 aa28.73■■■□□ 2.19
RIMS3-201ENST00000372683 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
RIMS3-201ENST00000372683 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
RIMS3-201ENST00000372683 BAZ1AQ9NRL2 1556 aaPredicted RBP28.55■■■□□ 2.16
RIMS3-201ENST00000372683 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
RIMS3-201ENST00000372683 LAMC3Q9Y6N6 1575 aa28.47■■■□□ 2.15
RIMS3-201ENST00000372683 KIF21AQ7Z4S6 1674 aa28.39■■■□□ 2.13
RIMS3-201ENST00000372683 PDS5BQ9NTI5 1447 aa28.29■■■□□ 2.12
RIMS3-201ENST00000372683 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
RIMS3-201ENST00000372683 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
RIMS3-201ENST00000372683 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
RIMS3-201ENST00000372683 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
RIMS3-201ENST00000372683 WDR62O43379 1518 aa28.07■■■□□ 2.08
RIMS3-201ENST00000372683 WIZO95785 1651 aa27.94■■■□□ 2.06
RIMS3-201ENST00000372683 SUPT5HO00267 1087 aaKnown RBP27.93■■■□□ 2.06
RIMS3-201ENST00000372683 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
RIMS3-201ENST00000372683 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
RIMS3-201ENST00000372683 CFTRP13569 1480 aa27.7■■■□□ 2.03
RIMS3-201ENST00000372683 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
RIMS3-201ENST00000372683 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
RIMS3-201ENST00000372683 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
RIMS3-201ENST00000372683 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
RIMS3-201ENST00000372683 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
RIMS3-201ENST00000372683 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
RIMS3-201ENST00000372683 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
RIMS3-201ENST00000372683 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
RIMS3-201ENST00000372683 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
RIMS3-201ENST00000372683 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
RIMS3-201ENST00000372683 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
RIMS3-201ENST00000372683 TOPBP1Q92547 1522 aa27.25■■□□□ 1.95
RIMS3-201ENST00000372683 EIF4G3O43432 1585 aaKnown RBP27.23■■□□□ 1.95
RIMS3-201ENST00000372683 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
RIMS3-201ENST00000372683 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
RIMS3-201ENST00000372683 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
RIMS3-201ENST00000372683 CHD1O14646 1710 aa27.11■■□□□ 1.93
RIMS3-201ENST00000372683 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
RIMS3-201ENST00000372683 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
RIMS3-201ENST00000372683 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
RIMS3-201ENST00000372683 AQRO60306 1485 aaKnown RBP eCLIP27.02■■□□□ 1.92
RIMS3-201ENST00000372683 ARAP1Q96P48 1450 aa27.02■■□□□ 1.92
RIMS3-201ENST00000372683 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
RIMS3-201ENST00000372683 TRHP20396 242 aaPredicted RBP26.93■■□□□ 1.9
RIMS3-201ENST00000372683 FBLN2P98095 1184 aa26.92■■□□□ 1.9
RIMS3-201ENST00000372683 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
RIMS3-201ENST00000372683 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
RIMS3-201ENST00000372683 TDRD9Q8NDG6 1382 aaKnown RBP26.78■■□□□ 1.88
RIMS3-201ENST00000372683 CLASP1Q7Z460 1538 aa26.77■■□□□ 1.88
RIMS3-201ENST00000372683 SOGA1O94964 1423 aa26.77■■□□□ 1.88
RIMS3-201ENST00000372683 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
RIMS3-201ENST00000372683 SYNJ1O43426 1573 aa26.72■■□□□ 1.87
RIMS3-201ENST00000372683 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
RIMS3-201ENST00000372683 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
RIMS3-201ENST00000372683 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
RIMS3-201ENST00000372683 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
RIMS3-201ENST00000372683 CUX1P39880 1505 aa26.62■■□□□ 1.85
RIMS3-201ENST00000372683 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
RIMS3-201ENST00000372683 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
RIMS3-201ENST00000372683 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
RIMS3-201ENST00000372683 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
RIMS3-201ENST00000372683 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
RIMS3-201ENST00000372683 ABCA10Q8WWZ4 1543 aa26.38■■□□□ 1.81
RIMS3-201ENST00000372683 ERCC6L2Q5T890 1561 aa26.31■■□□□ 1.8
RIMS3-201ENST00000372683 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
RIMS3-201ENST00000372683 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
RIMS3-201ENST00000372683 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
RIMS3-201ENST00000372683 NUP160Q12769 1436 aa26.2■■□□□ 1.79
RIMS3-201ENST00000372683 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
RIMS3-201ENST00000372683 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
RIMS3-201ENST00000372683 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
RIMS3-201ENST00000372683 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
RIMS3-201ENST00000372683 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
RIMS3-201ENST00000372683 KIF13AQ9H1H9 1805 aa26.07■■□□□ 1.76
RIMS3-201ENST00000372683 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
RIMS3-201ENST00000372683 PRG4Q92954 1404 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms