RNA–Protein interactions for RNA: ENST00000325017.3

NKX2-6-201, Transcript of NK2 homeobox 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-6, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6-201ENST00000325017 NISCHQ9Y2I1 1504 aa40.87■■■■■ 4.13
NKX2-6-201ENST00000325017 ABCC9O60706 1549 aa36.69■■■■□ 3.46
NKX2-6-201ENST00000325017 CCDC180Q9P1Z9 1646 aa36.5■■■■□ 3.43
NKX2-6-201ENST00000325017 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
NKX2-6-201ENST00000325017 DCAF8L2P0C7V8 631 aa34.67■■■■□ 3.14
NKX2-6-201ENST00000325017 NACADO15069 1562 aa34.56■■■■□ 3.12
NKX2-6-201ENST00000325017 DNAJC5BQ9UF47 199 aa34.47■■■■□ 3.11
NKX2-6-201ENST00000325017 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
NKX2-6-201ENST00000325017 MYO15BQ96JP2 1530 aa34.05■■■■□ 3.04
NKX2-6-201ENST00000325017 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
NKX2-6-201ENST00000325017 ZCCHC6Q5VYS8 1495 aaKnown RBP33.87■■■■□ 3.01
NKX2-6-201ENST00000325017 BICRAQ9NZM4 1560 aa33.85■■■■□ 3.01
NKX2-6-201ENST00000325017 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
NKX2-6-201ENST00000325017 SCRIBQ14160 1630 aa33.43■■■□□ 2.94
NKX2-6-201ENST00000325017 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
NKX2-6-201ENST00000325017 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
NKX2-6-201ENST00000325017 CECR2Q9BXF3 1484 aa33■■■□□ 2.87
NKX2-6-201ENST00000325017 EIF4G1Q04637 1599 aaKnown RBP33■■■□□ 2.87
NKX2-6-201ENST00000325017 NCAPD3P42695 1498 aa31.97■■■□□ 2.71
NKX2-6-201ENST00000325017 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
NKX2-6-201ENST00000325017 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
NKX2-6-201ENST00000325017 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
NKX2-6-201ENST00000325017 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
NKX2-6-201ENST00000325017 BAZ1AQ9NRL2 1556 aaPredicted RBP31.67■■■□□ 2.66
NKX2-6-201ENST00000325017 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
NKX2-6-201ENST00000325017 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
NKX2-6-201ENST00000325017 NESP48681 1621 aa31.55■■■□□ 2.64
NKX2-6-201ENST00000325017 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
NKX2-6-201ENST00000325017 DNAJC5Q9H3Z4 198 aa31.52■■■□□ 2.64
NKX2-6-201ENST00000325017 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
NKX2-6-201ENST00000325017 CUX2O14529 1486 aa31.47■■■□□ 2.63
NKX2-6-201ENST00000325017 LAMC3Q9Y6N6 1575 aa31.17■■■□□ 2.58
NKX2-6-201ENST00000325017 WIZO95785 1651 aa31.13■■■□□ 2.57
NKX2-6-201ENST00000325017 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
NKX2-6-201ENST00000325017 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
NKX2-6-201ENST00000325017 CADPSQ9ULU8 1353 aa31.04■■■□□ 2.56
NKX2-6-201ENST00000325017 KIF21AQ7Z4S6 1674 aa31.01■■■□□ 2.55
NKX2-6-201ENST00000325017 RSF1Q96T23 1441 aaPredicted RBP30.92■■■□□ 2.54
NKX2-6-201ENST00000325017 MRC2Q9UBG0 1479 aa30.8■■■□□ 2.52
NKX2-6-201ENST00000325017 TOP2AP11388 1531 aaKnown RBP30.7■■■□□ 2.51
NKX2-6-201ENST00000325017 WDR62O43379 1518 aa30.68■■■□□ 2.5
NKX2-6-201ENST00000325017 FANCD2Q9BXW9 1451 aa30.68■■■□□ 2.5
NKX2-6-201ENST00000325017 CEP164Q9UPV0 1460 aa30.68■■■□□ 2.5
NKX2-6-201ENST00000325017 CFTRP13569 1480 aa30.67■■■□□ 2.5
NKX2-6-201ENST00000325017 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
NKX2-6-201ENST00000325017 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
NKX2-6-201ENST00000325017 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
NKX2-6-201ENST00000325017 PRDM2Q13029 1718 aa30.17■■■□□ 2.42
NKX2-6-201ENST00000325017 OSCARQ8IYS5 282 aa30.15■■■□□ 2.42
NKX2-6-201ENST00000325017 TOPBP1Q92547 1522 aa30.1■■■□□ 2.41
NKX2-6-201ENST00000325017 ZNF608Q9ULD9 1512 aaPredicted RBP30.09■■■□□ 2.41
NKX2-6-201ENST00000325017 IFT140Q96RY7 1462 aa30.06■■■□□ 2.4
NKX2-6-201ENST00000325017 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
NKX2-6-201ENST00000325017 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
NKX2-6-201ENST00000325017 AQRO60306 1485 aaKnown RBP eCLIP29.84■■■□□ 2.37
NKX2-6-201ENST00000325017 EIF4G3O43432 1585 aaKnown RBP29.82■■■□□ 2.36
NKX2-6-201ENST00000325017 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
NKX2-6-201ENST00000325017 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
NKX2-6-201ENST00000325017 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
NKX2-6-201ENST00000325017 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
NKX2-6-201ENST00000325017 SOGA1O94964 1423 aa29.7■■■□□ 2.34
NKX2-6-201ENST00000325017 TDRD9Q8NDG6 1382 aaKnown RBP29.69■■■□□ 2.34
NKX2-6-201ENST00000325017 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
NKX2-6-201ENST00000325017 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
NKX2-6-201ENST00000325017 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
NKX2-6-201ENST00000325017 FBLN2P98095 1184 aa29.68■■■□□ 2.34
NKX2-6-201ENST00000325017 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
NKX2-6-201ENST00000325017 ARHGEF11O15085 1522 aa29.62■■■□□ 2.33
NKX2-6-201ENST00000325017 CUX1P39880 1505 aa29.62■■■□□ 2.33
NKX2-6-201ENST00000325017 CHD1O14646 1710 aa29.57■■■□□ 2.32
NKX2-6-201ENST00000325017 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
NKX2-6-201ENST00000325017 SNAPC4Q5SXM2 1469 aa29.49■■■□□ 2.31
NKX2-6-201ENST00000325017 CHMP7Q8WUX9 453 aaPredicted RBP29.42■■■□□ 2.3
NKX2-6-201ENST00000325017 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
NKX2-6-201ENST00000325017 ARAP1Q96P48 1450 aa29.36■■■□□ 2.29
NKX2-6-201ENST00000325017 WDR97A6NE52 1622 aa29.36■■■□□ 2.29
NKX2-6-201ENST00000325017 MAGI1Q96QZ7 1491 aaPredicted RBP29.34■■■□□ 2.29
NKX2-6-201ENST00000325017 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
NKX2-6-201ENST00000325017 SYNJ2O15056 1496 aa29.27■■■□□ 2.28
NKX2-6-201ENST00000325017 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
NKX2-6-201ENST00000325017 ABCA10Q8WWZ4 1543 aa29.25■■■□□ 2.27
NKX2-6-201ENST00000325017 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
NKX2-6-201ENST00000325017 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
NKX2-6-201ENST00000325017 ABCA5Q8WWZ7 1642 aa29.17■■■□□ 2.26
NKX2-6-201ENST00000325017 TRHP20396 242 aaPredicted RBP29.17■■■□□ 2.26
NKX2-6-201ENST00000325017 WRNQ14191 1432 aaPredicted RBP eCLIP29.17■■■□□ 2.26
NKX2-6-201ENST00000325017 TOP2BQ02880 1626 aa29.09■■■□□ 2.25
NKX2-6-201ENST00000325017 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
NKX2-6-201ENST00000325017 GRIN2AQ12879 1464 aa29.01■■■□□ 2.23
NKX2-6-201ENST00000325017 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
NKX2-6-201ENST00000325017 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
NKX2-6-201ENST00000325017 NUP160Q12769 1436 aa28.91■■■□□ 2.22
NKX2-6-201ENST00000325017 CEP170Q5SW79 1584 aa28.91■■■□□ 2.22
NKX2-6-201ENST00000325017 ERCC6L2Q5T890 1561 aa28.91■■■□□ 2.22
NKX2-6-201ENST00000325017 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
NKX2-6-201ENST00000325017 SHROOM2Q13796 1616 aa28.71■■■□□ 2.19
NKX2-6-201ENST00000325017 JPH4Q96JJ6 628 aa28.69■■■□□ 2.18
NKX2-6-201ENST00000325017 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
NKX2-6-201ENST00000325017 IGF1RP08069 1367 aa28.62■■■□□ 2.17
NKX2-6-201ENST00000325017 KIF27Q86VH2 1401 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms