Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AP3S2P59780 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 AL731571.1-201ENST00000617058 5428 ntBASIC13.68□□□□□ -0.22
AP3S2P59780 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 RCN1P2-201ENST00000398357 915 ntBASIC13.68□□□□□ -0.22
AP3S2P59780 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 AC117947.1-201ENST00000427448 529 ntBASIC13.68□□□□□ -0.22
AP3S2P59780 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.68□□□□□ -0.22
AP3S2P59780 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.68□□□□□ -0.22
AP3S2P59780 ABCD1P5-201ENST00000445663 754 ntBASIC13.68□□□□□ -0.22
AP3S2P59780 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.68□□□□□ -0.22
AP3S2P59780 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S2P59780 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.68□□□□□ -0.22
AP3S2P59780 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.68□□□□□ -0.22
AP3S2P59780 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 AL031595.1-201ENST00000623969 4709 ntBASIC13.68□□□□□ -0.22
AP3S2P59780 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S2P59780 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S2P59780 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 ZBED1P1-201ENST00000502364 1930 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S2P59780 FAM8A3P-201ENST00000427218 844 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S2P59780 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S2P59780 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 MIR4497-201ENST00000583208 89 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 AC114341.1-201ENST00000618070 349 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
AP3S2P59780 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 PI4KAP1-204ENST00000612579 1703 ntBASIC13.67□□□□□ -0.22
AP3S2P59780 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S2P59780 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
AP3S2P59780 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S2P59780 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
AP3S2P59780 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S2P59780 AC005840.4-201ENST00000541242 2494 ntBASIC13.66□□□□□ -0.22
AP3S2P59780 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S2P59780 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S2P59780 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms