RNA–Protein interactions for RNA: ENST00000373487.8

PBX3-203, Transcript of PBX homeobox 3, humanhuman

TSL 5 BASIC

Gene PBX3, Length 2,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-203ENST00000373487 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
PBX3-203ENST00000373487 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
PBX3-203ENST00000373487 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
PBX3-203ENST00000373487 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
PBX3-203ENST00000373487 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
PBX3-203ENST00000373487 DCAF8L2P0C7V8 631 aa26.35■■□□□ 1.81
PBX3-203ENST00000373487 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
PBX3-203ENST00000373487 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
PBX3-203ENST00000373487 MYO15BQ96JP2 1530 aa25.54■■□□□ 1.68
PBX3-203ENST00000373487 SCRIBQ14160 1630 aa25.28■■□□□ 1.64
PBX3-203ENST00000373487 ABCC9O60706 1549 aa25.21■■□□□ 1.63
PBX3-203ENST00000373487 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
PBX3-203ENST00000373487 LOC105371045A0A1W2PR82 267 aa24.92■■□□□ 1.58
PBX3-203ENST00000373487 NACADO15069 1562 aa24.88■■□□□ 1.57
PBX3-203ENST00000373487 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
PBX3-203ENST00000373487 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
PBX3-203ENST00000373487 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
PBX3-203ENST00000373487 HRCP23327 699 aa24.68■■□□□ 1.54
PBX3-203ENST00000373487 MROH2BQ7Z745 1585 aa24.62■■□□□ 1.53
PBX3-203ENST00000373487 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
PBX3-203ENST00000373487 WIZO95785 1651 aa24.49■■□□□ 1.51
PBX3-203ENST00000373487 FAM9AQ8IZU1 332 aaPredicted RBP24.46■■□□□ 1.51
PBX3-203ENST00000373487 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.48
PBX3-203ENST00000373487 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
PBX3-203ENST00000373487 BAZ1AQ9NRL2 1556 aaPredicted RBP24.28■■□□□ 1.48
PBX3-203ENST00000373487 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
PBX3-203ENST00000373487 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
PBX3-203ENST00000373487 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
PBX3-203ENST00000373487 EIF4G1Q04637 1599 aaKnown RBP24.09■■□□□ 1.45
PBX3-203ENST00000373487 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
PBX3-203ENST00000373487 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
PBX3-203ENST00000373487 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
PBX3-203ENST00000373487 SMARCA2P51531 1590 aa23.95■■□□□ 1.42
PBX3-203ENST00000373487 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
PBX3-203ENST00000373487 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
PBX3-203ENST00000373487 SOGA1O94964 1423 aa23.69■■□□□ 1.38
PBX3-203ENST00000373487 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
PBX3-203ENST00000373487 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
PBX3-203ENST00000373487 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
PBX3-203ENST00000373487 CEP162Q5TB80 1403 aa23.52■■□□□ 1.36
PBX3-203ENST00000373487 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
PBX3-203ENST00000373487 ATAD2BQ9ULI0 1458 aa23.51■■□□□ 1.35
PBX3-203ENST00000373487 TTBK1Q5TCY1 1321 aaPredicted RBP23.5■■□□□ 1.35
PBX3-203ENST00000373487 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
PBX3-203ENST00000373487 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
PBX3-203ENST00000373487 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
PBX3-203ENST00000373487 EEA1Q15075 1411 aa23.46■■□□□ 1.35
PBX3-203ENST00000373487 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
PBX3-203ENST00000373487 SYNJ1O43426 1573 aa23.41■■□□□ 1.34
PBX3-203ENST00000373487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.34
PBX3-203ENST00000373487 GOLGA3Q08378 1498 aa23.35■■□□□ 1.33
PBX3-203ENST00000373487 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
PBX3-203ENST00000373487 CEP164Q9UPV0 1460 aa23.21■■□□□ 1.31
PBX3-203ENST00000373487 KIF21BO75037 1637 aa23.17■■□□□ 1.3
PBX3-203ENST00000373487 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
PBX3-203ENST00000373487 CLIP1P30622 1438 aa23.1■■□□□ 1.29
PBX3-203ENST00000373487 TOP2BQ02880 1626 aa23.09■■□□□ 1.29
PBX3-203ENST00000373487 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
PBX3-203ENST00000373487 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
PBX3-203ENST00000373487 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
PBX3-203ENST00000373487 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
PBX3-203ENST00000373487 VPS8Q8N3P4 1428 aa22.96■■□□□ 1.27
PBX3-203ENST00000373487 CUX1P39880 1505 aa22.92■■□□□ 1.26
PBX3-203ENST00000373487 HNRNPUL2Q1KMD3 747 aaKnown RBP22.91■■□□□ 1.26
PBX3-203ENST00000373487 APLP2Q06481 763 aa22.88■■□□□ 1.25
PBX3-203ENST00000373487 CFTRP13569 1480 aa22.84■■□□□ 1.25
PBX3-203ENST00000373487 PRXQ9BXM0 1461 aa22.84■■□□□ 1.25
PBX3-203ENST00000373487 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
PBX3-203ENST00000373487 DIEXFQ68CQ4 756 aaKnown RBP22.78■■□□□ 1.24
PBX3-203ENST00000373487 KIF27Q86VH2 1401 aa22.77■■□□□ 1.23
PBX3-203ENST00000373487 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
PBX3-203ENST00000373487 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
PBX3-203ENST00000373487 KANK4Q5T7N3 995 aaPredicted RBP22.64■■□□□ 1.22
PBX3-203ENST00000373487 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
PBX3-203ENST00000373487 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
PBX3-203ENST00000373487 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
PBX3-203ENST00000373487 CUX2O14529 1486 aa22.6■■□□□ 1.21
PBX3-203ENST00000373487 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
PBX3-203ENST00000373487 IGF1RP08069 1367 aa22.55■■□□□ 1.2
PBX3-203ENST00000373487 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
PBX3-203ENST00000373487 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
PBX3-203ENST00000373487 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
PBX3-203ENST00000373487 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
PBX3-203ENST00000373487 CARMIL1Q5VZK9 1371 aa22.45■■□□□ 1.18
PBX3-203ENST00000373487 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
PBX3-203ENST00000373487 RRBP1Q9P2E9 1410 aaKnown RBP22.41■■□□□ 1.18
PBX3-203ENST00000373487 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
PBX3-203ENST00000373487 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
PBX3-203ENST00000373487 ITGAEP38570 1179 aa22.36■■□□□ 1.17
PBX3-203ENST00000373487 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
PBX3-203ENST00000373487 NESP48681 1621 aa22.33■■□□□ 1.17
PBX3-203ENST00000373487 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
PBX3-203ENST00000373487 MIER1Q8N108 512 aa22.32■■□□□ 1.16
PBX3-203ENST00000373487 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
PBX3-203ENST00000373487 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
PBX3-203ENST00000373487 TIAM1Q13009 1591 aa22.28■■□□□ 1.16
PBX3-203ENST00000373487 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
PBX3-203ENST00000373487 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
PBX3-203ENST00000373487 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
PBX3-203ENST00000373487 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms