RNA–Protein interactions for RNA: ENST00000394654.3

RUNDC3B-203, Transcript of RUN domain containing 3B, humanhuman

APPRIS P4 TSL 2 BASIC

Gene RUNDC3B, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-203ENST00000394654 NISCHQ9Y2I1 1504 aa40.73■■■■■ 4.11
RUNDC3B-203ENST00000394654 CCDC180Q9P1Z9 1646 aa35.85■■■■□ 3.33
RUNDC3B-203ENST00000394654 ABCC9O60706 1549 aa34.93■■■■□ 3.18
RUNDC3B-203ENST00000394654 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
RUNDC3B-203ENST00000394654 ZCCHC6Q5VYS8 1495 aaKnown RBP34■■■■□ 3.03
RUNDC3B-203ENST00000394654 NACADO15069 1562 aa33.62■■■□□ 2.97
RUNDC3B-203ENST00000394654 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
RUNDC3B-203ENST00000394654 DCAF1Q9Y4B6 1507 aa33.55■■■□□ 2.96
RUNDC3B-203ENST00000394654 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
RUNDC3B-203ENST00000394654 SCRIBQ14160 1630 aa33.01■■■□□ 2.87
RUNDC3B-203ENST00000394654 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
RUNDC3B-203ENST00000394654 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
RUNDC3B-203ENST00000394654 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
RUNDC3B-203ENST00000394654 BICRAQ9NZM4 1560 aa32.69■■■□□ 2.82
RUNDC3B-203ENST00000394654 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
RUNDC3B-203ENST00000394654 DNAJC5BQ9UF47 199 aa31.77■■■□□ 2.68
RUNDC3B-203ENST00000394654 EIF4G1Q04637 1599 aaKnown RBP31.74■■■□□ 2.67
RUNDC3B-203ENST00000394654 CC2D2AQ9P2K1 1620 aa31.54■■■□□ 2.64
RUNDC3B-203ENST00000394654 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
RUNDC3B-203ENST00000394654 MROH2BQ7Z745 1585 aa31.5■■■□□ 2.63
RUNDC3B-203ENST00000394654 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
RUNDC3B-203ENST00000394654 RSF1Q96T23 1441 aaPredicted RBP31.28■■■□□ 2.6
RUNDC3B-203ENST00000394654 ATAD2BQ9ULI0 1458 aa31.23■■■□□ 2.59
RUNDC3B-203ENST00000394654 WIZO95785 1651 aa31.21■■■□□ 2.59
RUNDC3B-203ENST00000394654 SMARCA2P51531 1590 aa31.11■■■□□ 2.57
RUNDC3B-203ENST00000394654 PEG3Q9GZU2 1588 aa31.09■■■□□ 2.57
RUNDC3B-203ENST00000394654 NCAPD3P42695 1498 aa31.07■■■□□ 2.56
RUNDC3B-203ENST00000394654 SUPT5HO00267 1087 aaKnown RBP31.03■■■□□ 2.56
RUNDC3B-203ENST00000394654 BAZ1BQ9UIG0 1483 aaKnown RBP30.98■■■□□ 2.55
RUNDC3B-203ENST00000394654 HMGXB3Q12766 1538 aa30.91■■■□□ 2.54
RUNDC3B-203ENST00000394654 TOP2AP11388 1531 aaKnown RBP30.75■■■□□ 2.51
RUNDC3B-203ENST00000394654 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
RUNDC3B-203ENST00000394654 NESP48681 1621 aa30.41■■■□□ 2.46
RUNDC3B-203ENST00000394654 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
RUNDC3B-203ENST00000394654 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
RUNDC3B-203ENST00000394654 CFTRP13569 1480 aa30.14■■■□□ 2.42
RUNDC3B-203ENST00000394654 KIF21AQ7Z4S6 1674 aa29.98■■■□□ 2.39
RUNDC3B-203ENST00000394654 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
RUNDC3B-203ENST00000394654 PDS5BQ9NTI5 1447 aa29.95■■■□□ 2.38
RUNDC3B-203ENST00000394654 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
RUNDC3B-203ENST00000394654 PRDM2Q13029 1718 aa29.89■■■□□ 2.38
RUNDC3B-203ENST00000394654 CEP164Q9UPV0 1460 aa29.8■■■□□ 2.36
RUNDC3B-203ENST00000394654 THOC2Q8NI27 1593 aaKnown RBP29.68■■■□□ 2.34
RUNDC3B-203ENST00000394654 MRC2Q9UBG0 1479 aa29.64■■■□□ 2.34
RUNDC3B-203ENST00000394654 URB2Q14146 1524 aaKnown RBP29.64■■■□□ 2.34
RUNDC3B-203ENST00000394654 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
RUNDC3B-203ENST00000394654 WDR62O43379 1518 aa29.52■■■□□ 2.32
RUNDC3B-203ENST00000394654 CUX1P39880 1505 aa29.5■■■□□ 2.31
RUNDC3B-203ENST00000394654 TOPBP1Q92547 1522 aa29.5■■■□□ 2.31
RUNDC3B-203ENST00000394654 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
RUNDC3B-203ENST00000394654 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
RUNDC3B-203ENST00000394654 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
RUNDC3B-203ENST00000394654 CUX2O14529 1486 aa29.33■■■□□ 2.29
RUNDC3B-203ENST00000394654 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
RUNDC3B-203ENST00000394654 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
RUNDC3B-203ENST00000394654 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
RUNDC3B-203ENST00000394654 RAD54L2Q9Y4B4 1467 aa29.27■■■□□ 2.28
RUNDC3B-203ENST00000394654 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
RUNDC3B-203ENST00000394654 SOGA1O94964 1423 aa29.18■■■□□ 2.26
RUNDC3B-203ENST00000394654 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
RUNDC3B-203ENST00000394654 TRIM41Q8WV44 630 aa29.14■■■□□ 2.26
RUNDC3B-203ENST00000394654 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
RUNDC3B-203ENST00000394654 ZNF608Q9ULD9 1512 aaPredicted RBP29.13■■■□□ 2.25
RUNDC3B-203ENST00000394654 IFT140Q96RY7 1462 aa29.11■■■□□ 2.25
RUNDC3B-203ENST00000394654 TDRD9Q8NDG6 1382 aaKnown RBP29.06■■■□□ 2.24
RUNDC3B-203ENST00000394654 AQRO60306 1485 aaKnown RBP eCLIP29.03■■■□□ 2.24
RUNDC3B-203ENST00000394654 WDR97A6NE52 1622 aa28.98■■■□□ 2.23
RUNDC3B-203ENST00000394654 ABCA10Q8WWZ4 1543 aa28.96■■■□□ 2.23
RUNDC3B-203ENST00000394654 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
RUNDC3B-203ENST00000394654 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
RUNDC3B-203ENST00000394654 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
RUNDC3B-203ENST00000394654 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
RUNDC3B-203ENST00000394654 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
RUNDC3B-203ENST00000394654 PBRM1Q86U86 1689 aa28.74■■■□□ 2.19
RUNDC3B-203ENST00000394654 FAM9AQ8IZU1 332 aaPredicted RBP28.73■■■□□ 2.19
RUNDC3B-203ENST00000394654 GRIN2BQ13224 1484 aa28.71■■■□□ 2.19
RUNDC3B-203ENST00000394654 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
RUNDC3B-203ENST00000394654 IGF1RP08069 1367 aa28.65■■■□□ 2.18
RUNDC3B-203ENST00000394654 FBLN2P98095 1184 aa28.63■■■□□ 2.17
RUNDC3B-203ENST00000394654 ERICH3Q5RHP9 1530 aa28.58■■■□□ 2.17
RUNDC3B-203ENST00000394654 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
RUNDC3B-203ENST00000394654 CHD1O14646 1710 aa28.52■■■□□ 2.16
RUNDC3B-203ENST00000394654 ADAMTS12P58397 1594 aa28.52■■■□□ 2.16
RUNDC3B-203ENST00000394654 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
RUNDC3B-203ENST00000394654 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
RUNDC3B-203ENST00000394654 SYNJ2O15056 1496 aa28.47■■■□□ 2.15
RUNDC3B-203ENST00000394654 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
RUNDC3B-203ENST00000394654 CARMIL1Q5VZK9 1371 aa28.47■■■□□ 2.15
RUNDC3B-203ENST00000394654 EHMT2Q96KQ7 1210 aa28.46■■■□□ 2.15
RUNDC3B-203ENST00000394654 CUL7Q14999 1698 aa28.4■■■□□ 2.14
RUNDC3B-203ENST00000394654 EEA1Q15075 1411 aa28.39■■■□□ 2.13
RUNDC3B-203ENST00000394654 GRIN2AQ12879 1464 aa28.38■■■□□ 2.13
RUNDC3B-203ENST00000394654 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
RUNDC3B-203ENST00000394654 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
RUNDC3B-203ENST00000394654 RAPGEF2Q9Y4G8 1499 aa28.3■■■□□ 2.12
RUNDC3B-203ENST00000394654 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
RUNDC3B-203ENST00000394654 NUP160Q12769 1436 aa28.21■■■□□ 2.11
RUNDC3B-203ENST00000394654 KIF21BO75037 1637 aa28.15■■■□□ 2.1
RUNDC3B-203ENST00000394654 CLASP1Q7Z460 1538 aa28.14■■■□□ 2.09
RUNDC3B-203ENST00000394654 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms