RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.43
CACTIN-203ENST00000429344 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
CACTIN-203ENST00000429344 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
CACTIN-203ENST00000429344 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
CACTIN-203ENST00000429344 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
CACTIN-203ENST00000429344 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
CACTIN-203ENST00000429344 ABCC9O60706 1549 aa24.87■■□□□ 1.57
CACTIN-203ENST00000429344 PCGF6Q9BYE7 350 aa24.76■■□□□ 1.55
CACTIN-203ENST00000429344 HRCP23327 699 aa24.58■■□□□ 1.52
CACTIN-203ENST00000429344 CHIC1Q5VXU3 224 aa24.54■■□□□ 1.52
CACTIN-203ENST00000429344 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
CACTIN-203ENST00000429344 DCAF1Q9Y4B6 1507 aa24.47■■□□□ 1.51
CACTIN-203ENST00000429344 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
CACTIN-203ENST00000429344 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
CACTIN-203ENST00000429344 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
CACTIN-203ENST00000429344 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
CACTIN-203ENST00000429344 NACADO15069 1562 aa24■■□□□ 1.43
CACTIN-203ENST00000429344 PABPN1Q86U42 306 aaKnown RBP eCLIP23.95■■□□□ 1.42
CACTIN-203ENST00000429344 FAM9AQ8IZU1 332 aaPredicted RBP23.91■■□□□ 1.42
CACTIN-203ENST00000429344 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
CACTIN-203ENST00000429344 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
CACTIN-203ENST00000429344 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.4
CACTIN-203ENST00000429344 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
CACTIN-203ENST00000429344 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
CACTIN-203ENST00000429344 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
CACTIN-203ENST00000429344 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
CACTIN-203ENST00000429344 WIZO95785 1651 aa23.3■■□□□ 1.32
CACTIN-203ENST00000429344 BAZ1AQ9NRL2 1556 aaPredicted RBP23.29■■□□□ 1.32
CACTIN-203ENST00000429344 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
CACTIN-203ENST00000429344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.12■■□□□ 1.29
CACTIN-203ENST00000429344 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
CACTIN-203ENST00000429344 CCER1Q8TC90 406 aaPredicted RBP23.07■■□□□ 1.28
CACTIN-203ENST00000429344 SMARCA4P51532 1647 aa23.02■■□□□ 1.28
CACTIN-203ENST00000429344 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
CACTIN-203ENST00000429344 UBTFP17480 764 aaKnown RBP22.97■■□□□ 1.27
CACTIN-203ENST00000429344 CCDC88BA6NC98 1476 aa22.97■■□□□ 1.27
CACTIN-203ENST00000429344 UNC13AQ9UPW8 1703 aa22.93■■□□□ 1.26
CACTIN-203ENST00000429344 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
CACTIN-203ENST00000429344 TOP2AP11388 1531 aaKnown RBP22.9■■□□□ 1.26
CACTIN-203ENST00000429344 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
CACTIN-203ENST00000429344 BAZ1BQ9UIG0 1483 aaKnown RBP22.82■■□□□ 1.24
CACTIN-203ENST00000429344 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
CACTIN-203ENST00000429344 NEUROD1Q13562 356 aa22.73■■□□□ 1.23
CACTIN-203ENST00000429344 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
CACTIN-203ENST00000429344 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
CACTIN-203ENST00000429344 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
CACTIN-203ENST00000429344 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.23
CACTIN-203ENST00000429344 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
CACTIN-203ENST00000429344 GTF3C3Q9Y5Q9 886 aa22.67■■□□□ 1.22
CACTIN-203ENST00000429344 ACIN1Q9UKV3 1341 aaKnown RBP22.66■■□□□ 1.22
CACTIN-203ENST00000429344 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.215e-6■■■■■ 54.3
CACTIN-203ENST00000429344 SOGA1O94964 1423 aa22.62■■□□□ 1.21
CACTIN-203ENST00000429344 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
CACTIN-203ENST00000429344 APLP2Q06481 763 aa22.51■■□□□ 1.19
CACTIN-203ENST00000429344 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
CACTIN-203ENST00000429344 HNRNPUL2Q1KMD3 747 aaKnown RBP22.44■■□□□ 1.18
CACTIN-203ENST00000429344 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
CACTIN-203ENST00000429344 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
CACTIN-203ENST00000429344 EEA1Q15075 1411 aa22.33■■□□□ 1.17
CACTIN-203ENST00000429344 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
CACTIN-203ENST00000429344 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
CACTIN-203ENST00000429344 MYT1Q01538 1121 aa22.25■■□□□ 1.15
CACTIN-203ENST00000429344 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
CACTIN-203ENST00000429344 TNIKQ9UKE5 1360 aa22.25■■□□□ 1.15
CACTIN-203ENST00000429344 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
CACTIN-203ENST00000429344 SYNJ1O43426 1573 aa22.2■■□□□ 1.14
CACTIN-203ENST00000429344 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
CACTIN-203ENST00000429344 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
CACTIN-203ENST00000429344 MIER1Q8N108 512 aa22.14■■□□□ 1.14
CACTIN-203ENST00000429344 CLIP1P30622 1438 aa22.13■■□□□ 1.13
CACTIN-203ENST00000429344 HMGXB3Q12766 1538 aa22.09■■□□□ 1.13
CACTIN-203ENST00000429344 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
CACTIN-203ENST00000429344 RAPGEF2Q9Y4G8 1499 aa22.04■■□□□ 1.12
CACTIN-203ENST00000429344 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
CACTIN-203ENST00000429344 P3H3Q8IVL6 736 aa22■■□□□ 1.11
CACTIN-203ENST00000429344 CC2D2AQ9P2K1 1620 aa21.99■■□□□ 1.11
CACTIN-203ENST00000429344 CFTRP13569 1480 aa21.98■■□□□ 1.11
CACTIN-203ENST00000429344 ITGAEP38570 1179 aa21.95■■□□□ 1.11
CACTIN-203ENST00000429344 CUX2O14529 1486 aa21.95■■□□□ 1.1
CACTIN-203ENST00000429344 DNAJC5BQ9UF47 199 aa21.9■■□□□ 1.1
CACTIN-203ENST00000429344 CUX1P39880 1505 aa21.89■■□□□ 1.1
CACTIN-203ENST00000429344 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
CACTIN-203ENST00000429344 FANCD2Q9BXW9 1451 aa21.84■■□□□ 1.09
CACTIN-203ENST00000429344 NESP48681 1621 aa21.83■■□□□ 1.08
CACTIN-203ENST00000429344 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
CACTIN-203ENST00000429344 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
CACTIN-203ENST00000429344 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CACTIN-203ENST00000429344 KIF21BO75037 1637 aa21.75■■□□□ 1.07
CACTIN-203ENST00000429344 IGF1RP08069 1367 aa21.7■■□□□ 1.06
CACTIN-203ENST00000429344 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
CACTIN-203ENST00000429344 TDRD9Q8NDG6 1382 aaKnown RBP21.68■■□□□ 1.06
CACTIN-203ENST00000429344 KANK4Q5T7N3 995 aaPredicted RBP21.68■■□□□ 1.06
CACTIN-203ENST00000429344 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
CACTIN-203ENST00000429344 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
CACTIN-203ENST00000429344 BCANQ96GW7 911 aa21.65■■□□□ 1.06
CACTIN-203ENST00000429344 FAM50AQ14320 339 aaKnown RBP21.65■■□□□ 1.06
CACTIN-203ENST00000429344 PDS5BQ9NTI5 1447 aa21.62■■□□□ 1.05
CACTIN-203ENST00000429344 ARID3CA6NKF2 412 aa21.58■■□□□ 1.05
CACTIN-203ENST00000429344 FBLN2P98095 1184 aa21.55■■□□□ 1.04
CACTIN-203ENST00000429344 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms