Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 HAUS4P1-201ENST00000406739 1145 ntBASIC14.38□□□□□ -0.11
HLA-DPB1P04440 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DPB1P04440 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 ZNF259P1-201ENST00000407656 1365 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 AC023908.3-201ENST00000564211 3047 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 AC011477.6-201ENST00000604980 1927 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CXCL1P1-201ENST00000502804 216 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 AC005412.3-201ENST00000580309 715 ntBASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DPB1P04440 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 AC026748.1-201ENST00000624349 3251 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 SNX18-202ENST00000343017 3140 ntBASIC14.36□□□□□ -0.11
HLA-DPB1P04440 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DPB1P04440 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms