Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.3■□□□□ 0.041e-12■■□□□ 11.8
RPS3P23396 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.55□□□□□ -0.081e-12■■□□□ 11.8
RPS3P23396 RTN4-210ENST00000427710 589 ntTSL 414.43□□□□□ -0.13e-32■■□□□ 11.8
RPS3P23396 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.58e-16■■□□□ 11.8
RPS3P23396 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.92■□□□□ 0.143e-12■■□□□ 11.8
RPS3P23396 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.813e-7■■□□□ 11.8
RPS3P23396 RPLP0-227ENST00000552902 869 ntTSL 218.62■□□□□ 0.573e-7■■□□□ 11.8
RPS3P23396 RPLP0-223ENST00000551783 676 ntTSL 218.58■□□□□ 0.563e-7■■□□□ 11.8
RPS3P23396 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.423e-7■■□□□ 11.8
RPS3P23396 RPLP0-218ENST00000550856 1003 ntTSL 217.11■□□□□ 0.333e-7■■□□□ 11.8
RPS3P23396 RPLP0-226ENST00000552461 2591 ntTSL 215.76■□□□□ 0.113e-7■■□□□ 11.8
RPS3P23396 RPLP0-206ENST00000546990 770 ntTSL 313.95□□□□□ -0.183e-7■■□□□ 11.8
RPS3P23396 ELAC2-210ENST00000491478 758 ntTSL 513.7□□□□□ -0.224e-6■■□□□ 11.8
RPS3P23396 RPLP0-204ENST00000546564 844 ntTSL 212.22□□□□□ -0.453e-7■■□□□ 11.8
RPS3P23396 RPLP0-216ENST00000550296 562 ntTSL 212.22□□□□□ -0.453e-7■■□□□ 11.8
RPS3P23396 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC12.19□□□□□ -0.463e-7■■□□□ 11.8
RPS3P23396 RPLP0-209ENST00000547211 781 ntTSL 312.19□□□□□ -0.463e-7■■□□□ 11.8
RPS3P23396 RPLP0-215ENST00000549242 518 ntTSL 212.19□□□□□ -0.463e-7■■□□□ 11.8
RPS3P23396 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.593e-7■■□□□ 11.8
RPS3P23396 RPLP0-217ENST00000550423 561 ntTSL 311.39□□□□□ -0.593e-7■■□□□ 11.8
RPS3P23396 RPLP0-214ENST00000549098 1106 ntTSL 210.93□□□□□ -0.663e-7■■□□□ 11.8
RPS3P23396 RPLP0-224ENST00000551914 402 ntTSL 310.53□□□□□ -0.723e-7■■□□□ 11.8
RPS3P23396 RPLP0-208ENST00000547191 680 ntTSL 510.21□□□□□ -0.773e-7■■□□□ 11.8
RPS3P23396 RPLP0-210ENST00000547475 792 ntTSL 310.21□□□□□ -0.773e-7■■□□□ 11.8
RPS3P23396 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC10.05□□□□□ -0.83e-7■■□□□ 11.8
RPS3P23396 RPLP0-221ENST00000551258 966 ntTSL 510.05□□□□□ -0.83e-7■■□□□ 11.8
RPS3P23396 RPLP0-213ENST00000548568 1127 ntTSL 1 (best)10.03□□□□□ -0.83e-7■■□□□ 11.8
RPS3P23396 RPLP0-212ENST00000548551 543 ntTSL 29.69□□□□□ -0.863e-7■■□□□ 11.8
RPS3P23396 RPLP0-211ENST00000548495 651 ntTSL 39.51□□□□□ -0.893e-7■■□□□ 11.8
RPS3P23396 RPLP0-207ENST00000547173 864 ntTSL 38.58□□□□□ -1.043e-7■■□□□ 11.8
RPS3P23396 CTNNA1-227ENST00000521387 871 ntTSL 26.77□□□□□ -1.335e-8■■□□□ 11.8
RPS3P23396 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.643e-17■■□□□ 11.8
RPS3P23396 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.083e-17■■□□□ 11.8
RPS3P23396 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.663e-17■■□□□ 11.8
RPS3P23396 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.26□□□□□ -1.573e-17■■□□□ 11.8
RPS3P23396 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.49□□□□□ -1.693e-17■■□□□ 11.8
RPS3P23396 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.945e-7■■□□□ 11.8
RPS3P23396 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.795e-7■■□□□ 11.8
RPS3P23396 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.615e-7■■□□□ 11.8
RPS3P23396 CD55-209ENST00000488171 1389 ntTSL 318.61■□□□□ 0.575e-7■■□□□ 11.8
RPS3P23396 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.31■□□□□ 0.525e-7■■□□□ 11.8
RPS3P23396 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.135e-7■■□□□ 11.8
RPS3P23396 EIF4G1-230ENST00000460829 1804 ntTSL 219.84■□□□□ 0.777e-8■■□□□ 11.8
RPS3P23396 EIF4G1-233ENST00000475721 1271 ntTSL 219.25■□□□□ 0.677e-8■■□□□ 11.8
RPS3P23396 PKM-217ENST00000566809 560 ntTSL 419.94■□□□□ 0.781e-19■■□□□ 11.8
RPS3P23396 DDRGK1-204ENST00000496781 865 ntTSL 1 (best)10.33□□□□□ -0.765e-11■■□□□ 11.8
RPS3P23396 CRLF1-203ENST00000594325 1020 ntTSL 322.1■■□□□ 1.131e-11■■□□□ 11.8
RPS3P23396 ENY2-215ENST00000523335 1540 ntTSL 217.4■□□□□ 0.382e-7■■□□□ 11.8
RPS3P23396 ENY2-212ENST00000522407 541 ntTSL 416.06■□□□□ 0.162e-7■■□□□ 11.8
RPS3P23396 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.53■□□□□ 0.082e-7■■□□□ 11.8
RPS3P23396 API5-211ENST00000534695 560 ntTSL 5 BASIC15.14■□□□□ 0.012e-7■■□□□ 11.8
RPS3P23396 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.83□□□□□ -0.032e-7■■□□□ 11.8
RPS3P23396 API5-207ENST00000530300 553 ntTSL 214.79□□□□□ -0.042e-7■■□□□ 11.8
RPS3P23396 ENY2-206ENST00000518584 566 ntTSL 213.78□□□□□ -0.22e-7■■□□□ 11.8
RPS3P23396 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.71□□□□□ -0.212e-7■■□□□ 11.8
RPS3P23396 ENY2-203ENST00000517350 2150 ntTSL 1 (best)13.11□□□□□ -0.312e-7■■□□□ 11.8
RPS3P23396 ENY2-204ENST00000517756 445 ntTSL 510.67□□□□□ -0.72e-7■■□□□ 11.8
RPS3P23396 ENY2-207ENST00000519754 561 ntTSL 410.5□□□□□ -0.732e-7■■□□□ 11.8
RPS3P23396 ENY2-210ENST00000521662 562 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.732e-7■■□□□ 11.8
RPS3P23396 ENY2-214ENST00000522766 567 ntTSL 410.49□□□□□ -0.732e-7■■□□□ 11.8
RPS3P23396 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.752e-7■■□□□ 11.8
RPS3P23396 ENY2-202ENST00000517311 2966 ntTSL 29.66□□□□□ -0.862e-7■■□□□ 11.8
RPS3P23396 ENY2-208ENST00000520147 857 ntTSL 4 BASIC9.49□□□□□ -0.892e-7■■□□□ 11.8
RPS3P23396 AC092175.1-201ENST00000605325 200 ntBASIC9.29□□□□□ -0.922e-7■■□□□ 11.8
RPS3P23396 ENY2-201ENST00000339942 546 ntTSL 48.81□□□□□ -12e-7■■□□□ 11.8
RPS3P23396 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.53□□□□□ -1.042e-7■■□□□ 11.8
RPS3P23396 ENY2-209ENST00000521619 1384 ntTSL 1 (best)5.62□□□□□ -1.512e-7■■□□□ 11.8
RPS3P23396 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.9□□□□□ -1.792e-7■■□□□ 11.8
RPS3P23396 ENY2-216ENST00000523707 737 ntTSL 50.67□□□□□ -2.32e-7■■□□□ 11.8
RPS3P23396 LMAN1-205ENST00000592562 576 ntTSL 2-0.43□□□□□ -2.482e-7■■□□□ 11.8
RPS3P23396 BUB1-211ENST00000490632 755 ntTSL 27.04□□□□□ -1.281e-8■■□□□ 11.8
RPS3P23396 TXNDC11-206ENST00000573174 919 ntTSL 324.32■■□□□ 1.487e-9■■□□□ 11.8
RPS3P23396 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.197e-9■■□□□ 11.8
RPS3P23396 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.137e-9■■□□□ 11.8
RPS3P23396 GLB1-211ENST00000464355 557 ntTSL 312.19□□□□□ -0.462e-8■■□□□ 11.8
RPS3P23396 TKT-212ENST00000483706 565 ntTSL 215.35■□□□□ 0.056e-7■■□□□ 11.8
RPS3P23396 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)7.5□□□□□ -1.211e-7■■□□□ 11.8
RPS3P23396 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.82■□□□□ 0.442e-9■■□□□ 11.8
RPS3P23396 SEL1L-206ENST00000557372 594 ntTSL 315.34■□□□□ 0.052e-9■■□□□ 11.8
RPS3P23396 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.672e-6■■□□□ 11.8
RPS3P23396 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.5■□□□□ 0.552e-6■■□□□ 11.8
RPS3P23396 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.422e-6■■□□□ 11.8
RPS3P23396 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.292e-6■■□□□ 11.8
RPS3P23396 CHTOP-206ENST00000495554 2553 ntTSL 214.59□□□□□ -0.072e-6■■□□□ 11.8
RPS3P23396 KPNB1-211ENST00000582097 2347 ntTSL 28.4□□□□□ -1.072e-8■■□□□ 11.8
RPS3P23396 IPO4-205ENST00000558233 1015 ntTSL 515.22■□□□□ 0.038e-7■■□□□ 11.8
RPS3P23396 MED15-222ENST00000473244 2733 ntTSL 1 (best)18.95■□□□□ 0.628e-8■■□□□ 11.8
RPS3P23396 MED15-231ENST00000493216 4701 ntTSL 216.31■□□□□ 0.28e-8■■□□□ 11.8
RPS3P23396 MED15-229ENST00000489651 3563 ntTSL 1 (best)11.3□□□□□ -0.68e-8■■□□□ 11.8
RPS3P23396 PRKDC-204ENST00000521331 1087 ntTSL 214.18□□□□□ -0.143e-6■■□□□ 11.8
RPS3P23396 ENPP1-203ENST00000486853 732 ntTSL 228.71■■■□□ 2.192e-12■■□□□ 11.8
RPS3P23396 ENPP1-204ENST00000513998 3107 ntTSL 519.92■□□□□ 0.782e-12■■□□□ 11.8
RPS3P23396 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.282e-12■■□□□ 11.8
RPS3P23396 KRT8-209ENST00000547176 250 ntTSL 513.32□□□□□ -0.289e-7■■□□□ 11.8
RPS3P23396 LONP1-211ENST00000590558 2884 ntTSL 517.06■□□□□ 0.322e-7■■□□□ 11.8
RPS3P23396 ACTN1-208ENST00000553370 605 ntTSL 39.43□□□□□ -0.92e-6■■□□□ 11.8
RPS3P23396 HM13-207ENST00000464173 587 ntTSL 212.54□□□□□ -0.42e-13■■□□□ 11.8
RPS3P23396 GPI-214ENST00000590375 529 ntTSL 416.84■□□□□ 0.297e-14■■□□□ 11.7
RPS3P23396 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.68■□□□□ 0.92e-6■■□□□ 11.7
RPS3P23396 IPO4-204ENST00000558193 555 ntTSL 418.64■□□□□ 0.573e-9■■□□□ 11.7
Retrieved 100 of 24,271 protein–RNA pairs in 146.8 ms