RNA–Protein interactions for RNA: ENST00000464173.5

HM13-207, Transcript of histocompatibility minor 13, humanhuman

TSL 2

Gene HM13, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-207ENST00000464173 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
HM13-207ENST00000464173 ABCC9O60706 1549 aa27.26■■□□□ 1.96
HM13-207ENST00000464173 CCDC180Q9P1Z9 1646 aa26.97■■□□□ 1.91
HM13-207ENST00000464173 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
HM13-207ENST00000464173 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
HM13-207ENST00000464173 NACADO15069 1562 aa25.64■■□□□ 1.69
HM13-207ENST00000464173 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
HM13-207ENST00000464173 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
HM13-207ENST00000464173 MYO15BQ96JP2 1530 aa25.26■■□□□ 1.63
HM13-207ENST00000464173 UNC13AQ9UPW8 1703 aa25.11■■□□□ 1.61
HM13-207ENST00000464173 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
HM13-207ENST00000464173 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
HM13-207ENST00000464173 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
HM13-207ENST00000464173 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
HM13-207ENST00000464173 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
HM13-207ENST00000464173 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
HM13-207ENST00000464173 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
HM13-207ENST00000464173 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
HM13-207ENST00000464173 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
HM13-207ENST00000464173 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
HM13-207ENST00000464173 CUX2O14529 1486 aa23.7■■□□□ 1.38
HM13-207ENST00000464173 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
HM13-207ENST00000464173 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
HM13-207ENST00000464173 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
HM13-207ENST00000464173 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
HM13-207ENST00000464173 SMARCA4P51532 1647 aa23.39■■□□□ 1.33
HM13-207ENST00000464173 NESP48681 1621 aa23.33■■□□□ 1.32
HM13-207ENST00000464173 BAZ1BQ9UIG0 1483 aaKnown RBP23.28■■□□□ 1.32
HM13-207ENST00000464173 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
HM13-207ENST00000464173 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
HM13-207ENST00000464173 LAMC3Q9Y6N6 1575 aa23.16■■□□□ 1.3
HM13-207ENST00000464173 MROH2BQ7Z745 1585 aa23.14■■□□□ 1.29
HM13-207ENST00000464173 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.29
HM13-207ENST00000464173 PDS5BQ9NTI5 1447 aa23.1■■□□□ 1.29
HM13-207ENST00000464173 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
HM13-207ENST00000464173 CADPSQ9ULU8 1353 aa22.98■■□□□ 1.27
HM13-207ENST00000464173 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
HM13-207ENST00000464173 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
HM13-207ENST00000464173 WIZO95785 1651 aa22.84■■□□□ 1.25
HM13-207ENST00000464173 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
HM13-207ENST00000464173 WDR62O43379 1518 aa22.81■■□□□ 1.24
HM13-207ENST00000464173 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
HM13-207ENST00000464173 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
HM13-207ENST00000464173 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
HM13-207ENST00000464173 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
HM13-207ENST00000464173 CFTRP13569 1480 aa22.64■■□□□ 1.21
HM13-207ENST00000464173 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
HM13-207ENST00000464173 CCDC88BA6NC98 1476 aa22.47■■□□□ 1.19
HM13-207ENST00000464173 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
HM13-207ENST00000464173 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
HM13-207ENST00000464173 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
HM13-207ENST00000464173 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.15
HM13-207ENST00000464173 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.15
HM13-207ENST00000464173 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.15
HM13-207ENST00000464173 PRDM2Q13029 1718 aa22.2■■□□□ 1.14
HM13-207ENST00000464173 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
HM13-207ENST00000464173 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
HM13-207ENST00000464173 ARHGEF11O15085 1522 aa22.15■■□□□ 1.14
HM13-207ENST00000464173 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
HM13-207ENST00000464173 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
HM13-207ENST00000464173 EIF4G3O43432 1585 aaKnown RBP22.04■■□□□ 1.12
HM13-207ENST00000464173 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.122e-8■■□□□ 13.6
HM13-207ENST00000464173 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
HM13-207ENST00000464173 FBLN2P98095 1184 aa21.94■■□□□ 1.1
HM13-207ENST00000464173 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
HM13-207ENST00000464173 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
HM13-207ENST00000464173 CHD1O14646 1710 aa21.89■■□□□ 1.09
HM13-207ENST00000464173 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
HM13-207ENST00000464173 SOGA1O94964 1423 aa21.88■■□□□ 1.09
HM13-207ENST00000464173 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
HM13-207ENST00000464173 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
HM13-207ENST00000464173 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
HM13-207ENST00000464173 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
HM13-207ENST00000464173 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
HM13-207ENST00000464173 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
HM13-207ENST00000464173 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
HM13-207ENST00000464173 MAGI1Q96QZ7 1491 aaPredicted RBP21.74■■□□□ 1.07
HM13-207ENST00000464173 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
HM13-207ENST00000464173 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
HM13-207ENST00000464173 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
HM13-207ENST00000464173 CUX1P39880 1505 aa21.67■■□□□ 1.06
HM13-207ENST00000464173 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
HM13-207ENST00000464173 GAPVD1Q14C86 1478 aa21.58■■□□□ 1.05
HM13-207ENST00000464173 TOP2BQ02880 1626 aa21.56■■□□□ 1.04
HM13-207ENST00000464173 ABCA10Q8WWZ4 1543 aa21.53■■□□□ 1.04
HM13-207ENST00000464173 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
HM13-207ENST00000464173 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
HM13-207ENST00000464173 PBRM1Q86U86 1689 aa21.46■■□□□ 1.03
HM13-207ENST00000464173 ABCA5Q8WWZ7 1642 aa21.45■■□□□ 1.02
HM13-207ENST00000464173 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
HM13-207ENST00000464173 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
HM13-207ENST00000464173 NUP160Q12769 1436 aa21.38■■□□□ 1.01
HM13-207ENST00000464173 ERCC6L2Q5T890 1561 aa21.33■■□□□ 1.01
HM13-207ENST00000464173 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
HM13-207ENST00000464173 CEP170Q5SW79 1584 aa21.31■■□□□ 1
HM13-207ENST00000464173 ADAMTS12P58397 1594 aa21.31■■□□□ 1
HM13-207ENST00000464173 KIF27Q86VH2 1401 aa21.3■■□□□ 1
HM13-207ENST00000464173 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
HM13-207ENST00000464173 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
HM13-207ENST00000464173 JPH4Q96JJ6 628 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms