RNA–Protein interactions for RNA: ENST00000550423.5

RPLP0-217, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 3

Gene RPLP0, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-217ENST00000550423 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
RPLP0-217ENST00000550423 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
RPLP0-217ENST00000550423 ABCC9O60706 1549 aa22.55■■□□□ 1.2
RPLP0-217ENST00000550423 ZCCHC6Q5VYS8 1495 aaKnown RBP22.25■■□□□ 1.15
RPLP0-217ENST00000550423 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
RPLP0-217ENST00000550423 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
RPLP0-217ENST00000550423 MYO15BQ96JP2 1530 aa21.88■■□□□ 1.09
RPLP0-217ENST00000550423 NACADO15069 1562 aa21.77■■□□□ 1.08
RPLP0-217ENST00000550423 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
RPLP0-217ENST00000550423 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
RPLP0-217ENST00000550423 SCRIBQ14160 1630 aa21.29■■□□□ 1
RPLP0-217ENST00000550423 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
RPLP0-217ENST00000550423 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
RPLP0-217ENST00000550423 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPLP0-217ENST00000550423 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
RPLP0-217ENST00000550423 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
RPLP0-217ENST00000550423 BAZ1AQ9NRL2 1556 aaPredicted RBP20.52■□□□□ 0.88
RPLP0-217ENST00000550423 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
RPLP0-217ENST00000550423 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
RPLP0-217ENST00000550423 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
RPLP0-217ENST00000550423 SMARCA4P51532 1647 aa20.44■□□□□ 0.86
RPLP0-217ENST00000550423 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
RPLP0-217ENST00000550423 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.84
RPLP0-217ENST00000550423 PEG3Q9GZU2 1588 aa20.25■□□□□ 0.83
RPLP0-217ENST00000550423 WIZO95785 1651 aa20.25■□□□□ 0.83
RPLP0-217ENST00000550423 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
RPLP0-217ENST00000550423 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
RPLP0-217ENST00000550423 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
RPLP0-217ENST00000550423 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
RPLP0-217ENST00000550423 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
RPLP0-217ENST00000550423 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
RPLP0-217ENST00000550423 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
RPLP0-217ENST00000550423 CFTRP13569 1480 aa19.56■□□□□ 0.72
RPLP0-217ENST00000550423 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
RPLP0-217ENST00000550423 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
RPLP0-217ENST00000550423 NESP48681 1621 aa19.43■□□□□ 0.7
RPLP0-217ENST00000550423 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
RPLP0-217ENST00000550423 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
RPLP0-217ENST00000550423 PRDM2Q13029 1718 aa19.38■□□□□ 0.69
RPLP0-217ENST00000550423 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
RPLP0-217ENST00000550423 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
RPLP0-217ENST00000550423 FANCD2Q9BXW9 1451 aa19.3■□□□□ 0.68
RPLP0-217ENST00000550423 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
RPLP0-217ENST00000550423 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
RPLP0-217ENST00000550423 CUX2O14529 1486 aa19.26■□□□□ 0.67
RPLP0-217ENST00000550423 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.67
RPLP0-217ENST00000550423 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
RPLP0-217ENST00000550423 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
RPLP0-217ENST00000550423 TOP2BQ02880 1626 aa19.16■□□□□ 0.66
RPLP0-217ENST00000550423 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
RPLP0-217ENST00000550423 CUX1P39880 1505 aa19.15■□□□□ 0.66
RPLP0-217ENST00000550423 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
RPLP0-217ENST00000550423 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.65
RPLP0-217ENST00000550423 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
RPLP0-217ENST00000550423 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
RPLP0-217ENST00000550423 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
RPLP0-217ENST00000550423 MRC2Q9UBG0 1479 aa19.05■□□□□ 0.64
RPLP0-217ENST00000550423 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
RPLP0-217ENST00000550423 WDR62O43379 1518 aa18.95■□□□□ 0.62
RPLP0-217ENST00000550423 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
RPLP0-217ENST00000550423 EEA1Q15075 1411 aa18.94■□□□□ 0.62
RPLP0-217ENST00000550423 SOGA1O94964 1423 aa18.92■□□□□ 0.62
RPLP0-217ENST00000550423 FAM9AQ8IZU1 332 aaPredicted RBP18.86■□□□□ 0.61
RPLP0-217ENST00000550423 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
RPLP0-217ENST00000550423 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
RPLP0-217ENST00000550423 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
RPLP0-217ENST00000550423 KIF27Q86VH2 1401 aa18.84■□□□□ 0.61
RPLP0-217ENST00000550423 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
RPLP0-217ENST00000550423 IFT140Q96RY7 1462 aa18.79■□□□□ 0.6
RPLP0-217ENST00000550423 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
RPLP0-217ENST00000550423 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
RPLP0-217ENST00000550423 IGF1RP08069 1367 aa18.7■□□□□ 0.58
RPLP0-217ENST00000550423 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
RPLP0-217ENST00000550423 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
RPLP0-217ENST00000550423 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
RPLP0-217ENST00000550423 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
RPLP0-217ENST00000550423 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
RPLP0-217ENST00000550423 KIF21BO75037 1637 aa18.65■□□□□ 0.58
RPLP0-217ENST00000550423 ERICH3Q5RHP9 1530 aa18.64■□□□□ 0.57
RPLP0-217ENST00000550423 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
RPLP0-217ENST00000550423 AQRO60306 1485 aaKnown RBP eCLIP18.62■□□□□ 0.577e-14■■■■■ 100
RPLP0-217ENST00000550423 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
RPLP0-217ENST00000550423 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
RPLP0-217ENST00000550423 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
RPLP0-217ENST00000550423 CUL7Q14999 1698 aa18.57■□□□□ 0.56
RPLP0-217ENST00000550423 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
RPLP0-217ENST00000550423 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
RPLP0-217ENST00000550423 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
RPLP0-217ENST00000550423 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
RPLP0-217ENST00000550423 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
RPLP0-217ENST00000550423 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
RPLP0-217ENST00000550423 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
RPLP0-217ENST00000550423 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
RPLP0-217ENST00000550423 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
RPLP0-217ENST00000550423 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
RPLP0-217ENST00000550423 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
RPLP0-217ENST00000550423 SYNJ2O15056 1496 aa18.39■□□□□ 0.54
RPLP0-217ENST00000550423 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
RPLP0-217ENST00000550423 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
RPLP0-217ENST00000550423 CHMP7Q8WUX9 453 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms