RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 NISCHQ9Y2I1 1504 aa24.17■■□□□ 1.46
SFPQ-201ENST00000357214 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
SFPQ-201ENST00000357214 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
SFPQ-201ENST00000357214 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
SFPQ-201ENST00000357214 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
SFPQ-201ENST00000357214 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
SFPQ-201ENST00000357214 HRCP23327 699 aa20.32■□□□□ 0.84
SFPQ-201ENST00000357214 MYT1Q01538 1121 aa20.26■□□□□ 0.83
SFPQ-201ENST00000357214 EHMT2Q96KQ7 1210 aa20.25■□□□□ 0.83
SFPQ-201ENST00000357214 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
SFPQ-201ENST00000357214 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
SFPQ-201ENST00000357214 ABCC9O60706 1549 aa20.13■□□□□ 0.81
SFPQ-201ENST00000357214 PPARGC1BQ86YN6 1023 aaKnown RBP20.12■□□□□ 0.81
SFPQ-201ENST00000357214 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
SFPQ-201ENST00000357214 LOC105371045A0A1W2PR82 267 aa19.85■□□□□ 0.77
SFPQ-201ENST00000357214 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
SFPQ-201ENST00000357214 SCAF1Q9H7N4 1312 aaKnown RBP19.74■□□□□ 0.75
SFPQ-201ENST00000357214 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
SFPQ-201ENST00000357214 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
SFPQ-201ENST00000357214 PABPN1Q86U42 306 aaKnown RBP eCLIP19.54■□□□□ 0.72
SFPQ-201ENST00000357214 DCAF1Q9Y4B6 1507 aa19.51■□□□□ 0.71
SFPQ-201ENST00000357214 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
SFPQ-201ENST00000357214 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
SFPQ-201ENST00000357214 TTBK1Q5TCY1 1321 aaPredicted RBP19.38■□□□□ 0.69
SFPQ-201ENST00000357214 RSF1Q96T23 1441 aaPredicted RBP19.28■□□□□ 0.68
SFPQ-201ENST00000357214 RANGAP1P46060 587 aaPredicted RBP19.26■□□□□ 0.67
SFPQ-201ENST00000357214 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
SFPQ-201ENST00000357214 GTF3C3Q9Y5Q9 886 aa19.07■□□□□ 0.64
SFPQ-201ENST00000357214 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
SFPQ-201ENST00000357214 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
SFPQ-201ENST00000357214 BCL11AQ9H165 835 aa19■□□□□ 0.63
SFPQ-201ENST00000357214 NACADO15069 1562 aa18.99■□□□□ 0.63
SFPQ-201ENST00000357214 NEUROD1Q13562 356 aa18.97■□□□□ 0.63
SFPQ-201ENST00000357214 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
SFPQ-201ENST00000357214 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
SFPQ-201ENST00000357214 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
SFPQ-201ENST00000357214 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
SFPQ-201ENST00000357214 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
SFPQ-201ENST00000357214 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.6
SFPQ-201ENST00000357214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.82■□□□□ 0.6
SFPQ-201ENST00000357214 APLP2Q06481 763 aa18.74■□□□□ 0.59
SFPQ-201ENST00000357214 WIZO95785 1651 aa18.67■□□□□ 0.58
SFPQ-201ENST00000357214 CSRNP3Q8WYN3 585 aa18.63■□□□□ 0.57
SFPQ-201ENST00000357214 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
SFPQ-201ENST00000357214 ATP1B4Q9UN42 357 aaPredicted RBP18.55■□□□□ 0.56
SFPQ-201ENST00000357214 HNRNPUL2Q1KMD3 747 aaKnown RBP18.53■□□□□ 0.56
SFPQ-201ENST00000357214 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
SFPQ-201ENST00000357214 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
SFPQ-201ENST00000357214 ABCC8Q09428 1581 aa18.47■□□□□ 0.55
SFPQ-201ENST00000357214 SOGA1O94964 1423 aa18.42■□□□□ 0.54
SFPQ-201ENST00000357214 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
SFPQ-201ENST00000357214 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
SFPQ-201ENST00000357214 ANP32EQ9BTT0 268 aa18.4■□□□□ 0.54
SFPQ-201ENST00000357214 DIEXFQ68CQ4 756 aaKnown RBP18.4■□□□□ 0.54
SFPQ-201ENST00000357214 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
SFPQ-201ENST00000357214 TNIKQ9UKE5 1360 aa18.32■□□□□ 0.52
SFPQ-201ENST00000357214 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
SFPQ-201ENST00000357214 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
SFPQ-201ENST00000357214 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
SFPQ-201ENST00000357214 EEA1Q15075 1411 aa18.28■□□□□ 0.52
SFPQ-201ENST00000357214 UNC13AQ9UPW8 1703 aa18.27■□□□□ 0.52
SFPQ-201ENST00000357214 ITGAEP38570 1179 aa18.26■□□□□ 0.51
SFPQ-201ENST00000357214 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
SFPQ-201ENST00000357214 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
SFPQ-201ENST00000357214 SMARCA2P51531 1590 aa18.22■□□□□ 0.51
SFPQ-201ENST00000357214 CLIP1P30622 1438 aa18.18■□□□□ 0.5
SFPQ-201ENST00000357214 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
SFPQ-201ENST00000357214 ZNF316A6NFI3 1004 aaPredicted RBP18.17■□□□□ 0.5
SFPQ-201ENST00000357214 P3H3Q8IVL6 736 aa18.12■□□□□ 0.49
SFPQ-201ENST00000357214 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
SFPQ-201ENST00000357214 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
SFPQ-201ENST00000357214 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
SFPQ-201ENST00000357214 ARID3CA6NKF2 412 aa18.02■□□□□ 0.47
SFPQ-201ENST00000357214 EIF4G1Q04637 1599 aaKnown RBP17.94■□□□□ 0.46
SFPQ-201ENST00000357214 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
SFPQ-201ENST00000357214 TSHZ2Q9NRE2 1034 aa17.92■□□□□ 0.46
SFPQ-201ENST00000357214 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
SFPQ-201ENST00000357214 FBLN2P98095 1184 aa17.89■□□□□ 0.46
SFPQ-201ENST00000357214 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
SFPQ-201ENST00000357214 MIER1Q8N108 512 aa17.88■□□□□ 0.45
SFPQ-201ENST00000357214 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
SFPQ-201ENST00000357214 KIF27Q86VH2 1401 aa17.83■□□□□ 0.44
SFPQ-201ENST00000357214 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
SFPQ-201ENST00000357214 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
SFPQ-201ENST00000357214 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
SFPQ-201ENST00000357214 BCANQ96GW7 911 aa17.72■□□□□ 0.43
SFPQ-201ENST00000357214 CC2D2AQ9P2K1 1620 aa17.7■□□□□ 0.42
SFPQ-201ENST00000357214 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
SFPQ-201ENST00000357214 KIF21BO75037 1637 aa17.69■□□□□ 0.42
SFPQ-201ENST00000357214 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
SFPQ-201ENST00000357214 CUX2O14529 1486 aa17.67■□□□□ 0.42
SFPQ-201ENST00000357214 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
SFPQ-201ENST00000357214 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
SFPQ-201ENST00000357214 CARMIL1Q5VZK9 1371 aa17.61■□□□□ 0.41
SFPQ-201ENST00000357214 CLSPNQ9HAW4 1339 aa17.58■□□□□ 0.41
SFPQ-201ENST00000357214 TOP2BQ02880 1626 aa17.57■□□□□ 0.4
SFPQ-201ENST00000357214 NESP48681 1621 aa17.57■□□□□ 0.4
SFPQ-201ENST00000357214 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
SFPQ-201ENST00000357214 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
SFPQ-201ENST00000357214 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms