RNA–Protein interactions for RNA: ENST00000549242.1

RPLP0-215, Transcript of ribosomal protein lateral stalk subunit P0, humanhuman

TSL 2

Gene RPLP0, Length 518 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0-215ENST00000549242 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
RPLP0-215ENST00000549242 CCDC180Q9P1Z9 1646 aa25.51■■□□□ 1.67
RPLP0-215ENST00000549242 ABCC9O60706 1549 aa24.36■■□□□ 1.49
RPLP0-215ENST00000549242 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
RPLP0-215ENST00000549242 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
RPLP0-215ENST00000549242 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
RPLP0-215ENST00000549242 NACADO15069 1562 aa23.83■■□□□ 1.41
RPLP0-215ENST00000549242 DCAF8L2P0C7V8 631 aa23.83■■□□□ 1.41
RPLP0-215ENST00000549242 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
RPLP0-215ENST00000549242 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
RPLP0-215ENST00000549242 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
RPLP0-215ENST00000549242 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
RPLP0-215ENST00000549242 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
RPLP0-215ENST00000549242 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
RPLP0-215ENST00000549242 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
RPLP0-215ENST00000549242 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
RPLP0-215ENST00000549242 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
RPLP0-215ENST00000549242 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
RPLP0-215ENST00000549242 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.16
RPLP0-215ENST00000549242 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
RPLP0-215ENST00000549242 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
RPLP0-215ENST00000549242 WIZO95785 1651 aa22.14■■□□□ 1.14
RPLP0-215ENST00000549242 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
RPLP0-215ENST00000549242 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
RPLP0-215ENST00000549242 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
RPLP0-215ENST00000549242 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
RPLP0-215ENST00000549242 NCAPD3P42695 1498 aa22■■□□□ 1.11
RPLP0-215ENST00000549242 HMGXB3Q12766 1538 aa21.94■■□□□ 1.1
RPLP0-215ENST00000549242 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
RPLP0-215ENST00000549242 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
RPLP0-215ENST00000549242 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
RPLP0-215ENST00000549242 CCDC88BA6NC98 1476 aa21.67■■□□□ 1.06
RPLP0-215ENST00000549242 CFTRP13569 1480 aa21.39■■□□□ 1.01
RPLP0-215ENST00000549242 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
RPLP0-215ENST00000549242 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
RPLP0-215ENST00000549242 NESP48681 1621 aa21.29■■□□□ 1
RPLP0-215ENST00000549242 PRDM2Q13029 1718 aa21.28■■□□□ 1
RPLP0-215ENST00000549242 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
RPLP0-215ENST00000549242 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
RPLP0-215ENST00000549242 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
RPLP0-215ENST00000549242 ABCC8Q09428 1581 aa21.05■□□□□ 0.96
RPLP0-215ENST00000549242 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
RPLP0-215ENST00000549242 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
RPLP0-215ENST00000549242 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
RPLP0-215ENST00000549242 CUX1P39880 1505 aa20.94■□□□□ 0.94
RPLP0-215ENST00000549242 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
RPLP0-215ENST00000549242 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
RPLP0-215ENST00000549242 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
RPLP0-215ENST00000549242 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
RPLP0-215ENST00000549242 ERCC6Q03468 1493 aa20.89■□□□□ 0.94
RPLP0-215ENST00000549242 DNMBPQ6XZF7 1577 aa20.88■□□□□ 0.93
RPLP0-215ENST00000549242 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
RPLP0-215ENST00000549242 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
RPLP0-215ENST00000549242 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
RPLP0-215ENST00000549242 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
RPLP0-215ENST00000549242 WDR62O43379 1518 aa20.82■□□□□ 0.92
RPLP0-215ENST00000549242 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
RPLP0-215ENST00000549242 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
RPLP0-215ENST00000549242 CUX2O14529 1486 aa20.66■□□□□ 0.9
RPLP0-215ENST00000549242 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
RPLP0-215ENST00000549242 TARBP1Q13395 1621 aaKnown RBP20.62■□□□□ 0.89
RPLP0-215ENST00000549242 SOGA1O94964 1423 aa20.61■□□□□ 0.89
RPLP0-215ENST00000549242 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
RPLP0-215ENST00000549242 ABCA10Q8WWZ4 1543 aa20.59■□□□□ 0.89
RPLP0-215ENST00000549242 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
RPLP0-215ENST00000549242 RUSC2Q8N2Y8 1516 aa20.53■□□□□ 0.88
RPLP0-215ENST00000549242 EEA1Q15075 1411 aa20.48■□□□□ 0.87
RPLP0-215ENST00000549242 KIF27Q86VH2 1401 aa20.47■□□□□ 0.87
RPLP0-215ENST00000549242 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
RPLP0-215ENST00000549242 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
RPLP0-215ENST00000549242 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
RPLP0-215ENST00000549242 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
RPLP0-215ENST00000549242 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
RPLP0-215ENST00000549242 AQRO60306 1485 aaKnown RBP eCLIP20.38■□□□□ 0.857e-14■■■■■ 100
RPLP0-215ENST00000549242 FAM9AQ8IZU1 332 aaPredicted RBP20.37■□□□□ 0.85
RPLP0-215ENST00000549242 IGF1RP08069 1367 aa20.36■□□□□ 0.85
RPLP0-215ENST00000549242 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
RPLP0-215ENST00000549242 ERICH3Q5RHP9 1530 aa20.35■□□□□ 0.85
RPLP0-215ENST00000549242 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
RPLP0-215ENST00000549242 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
RPLP0-215ENST00000549242 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
RPLP0-215ENST00000549242 CUL7Q14999 1698 aa20.26■□□□□ 0.83
RPLP0-215ENST00000549242 KIF21BO75037 1637 aa20.26■□□□□ 0.83
RPLP0-215ENST00000549242 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
RPLP0-215ENST00000549242 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
RPLP0-215ENST00000549242 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
RPLP0-215ENST00000549242 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
RPLP0-215ENST00000549242 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
RPLP0-215ENST00000549242 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
RPLP0-215ENST00000549242 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
RPLP0-215ENST00000549242 LOC105371045A0A1W2PR82 267 aa20.14■□□□□ 0.81
RPLP0-215ENST00000549242 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
RPLP0-215ENST00000549242 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
RPLP0-215ENST00000549242 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
RPLP0-215ENST00000549242 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
RPLP0-215ENST00000549242 CHD1O14646 1710 aa20.02■□□□□ 0.8
RPLP0-215ENST00000549242 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
RPLP0-215ENST00000549242 NUP160Q12769 1436 aa19.98■□□□□ 0.79
RPLP0-215ENST00000549242 CTTNBP2Q8WZ74 1663 aa19.97■□□□□ 0.79
RPLP0-215ENST00000549242 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms