RNA–Protein interactions for RNA: ENST00000489651.5

MED15-229, Transcript of mediator complex subunit 15, humanhuman

TSL 1 (best)

Gene MED15, Length 3,563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-229ENST00000489651 NISCHQ9Y2I1 1504 aa22.85■■□□□ 1.25
MED15-229ENST00000489651 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
MED15-229ENST00000489651 SUPT5HO00267 1087 aaKnown RBP20.07■□□□□ 0.8
MED15-229ENST00000489651 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
MED15-229ENST00000489651 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
MED15-229ENST00000489651 ZCCHC6Q5VYS8 1495 aaKnown RBP19.3■□□□□ 0.68
MED15-229ENST00000489651 PCGF6Q9BYE7 350 aa19.23■□□□□ 0.67
MED15-229ENST00000489651 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
MED15-229ENST00000489651 HRCP23327 699 aa19.16■□□□□ 0.66
MED15-229ENST00000489651 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
MED15-229ENST00000489651 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
MED15-229ENST00000489651 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
MED15-229ENST00000489651 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
MED15-229ENST00000489651 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
MED15-229ENST00000489651 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
MED15-229ENST00000489651 DCAF1Q9Y4B6 1507 aa18.6■□□□□ 0.57
MED15-229ENST00000489651 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
MED15-229ENST00000489651 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
MED15-229ENST00000489651 SCRIBQ14160 1630 aa18.3■□□□□ 0.52
MED15-229ENST00000489651 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
MED15-229ENST00000489651 ABCC9O60706 1549 aa18.23■□□□□ 0.51
MED15-229ENST00000489651 TTBK1Q5TCY1 1321 aaPredicted RBP18.09■□□□□ 0.49
MED15-229ENST00000489651 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
MED15-229ENST00000489651 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
MED15-229ENST00000489651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
MED15-229ENST00000489651 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
MED15-229ENST00000489651 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
MED15-229ENST00000489651 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
MED15-229ENST00000489651 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
MED15-229ENST00000489651 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
MED15-229ENST00000489651 NACADO15069 1562 aa17.75■□□□□ 0.43
MED15-229ENST00000489651 WIZO95785 1651 aa17.72■□□□□ 0.43
MED15-229ENST00000489651 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
MED15-229ENST00000489651 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
MED15-229ENST00000489651 CENPBP07199 599 aaPredicted RBP17.68■□□□□ 0.42
MED15-229ENST00000489651 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
MED15-229ENST00000489651 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
MED15-229ENST00000489651 RANGAP1P46060 587 aaPredicted RBP17.57■□□□□ 0.4
MED15-229ENST00000489651 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
MED15-229ENST00000489651 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
MED15-229ENST00000489651 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
MED15-229ENST00000489651 CEP162Q5TB80 1403 aa17.55■□□□□ 0.4
MED15-229ENST00000489651 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
MED15-229ENST00000489651 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
MED15-229ENST00000489651 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
MED15-229ENST00000489651 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
MED15-229ENST00000489651 APLP2Q06481 763 aa17.51■□□□□ 0.39
MED15-229ENST00000489651 SOGA1O94964 1423 aa17.5■□□□□ 0.39
MED15-229ENST00000489651 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■□□□□ 8.9
MED15-229ENST00000489651 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
MED15-229ENST00000489651 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
MED15-229ENST00000489651 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
MED15-229ENST00000489651 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
MED15-229ENST00000489651 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
MED15-229ENST00000489651 EEA1Q15075 1411 aa17.34■□□□□ 0.37
MED15-229ENST00000489651 BICRAQ9NZM4 1560 aa17.33■□□□□ 0.37
MED15-229ENST00000489651 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
MED15-229ENST00000489651 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
MED15-229ENST00000489651 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
MED15-229ENST00000489651 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
MED15-229ENST00000489651 CLIP1P30622 1438 aa17.23■□□□□ 0.35
MED15-229ENST00000489651 MIER1Q8N108 512 aa17.23■□□□□ 0.35
MED15-229ENST00000489651 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
MED15-229ENST00000489651 ITGAEP38570 1179 aa17.09■□□□□ 0.33
MED15-229ENST00000489651 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
MED15-229ENST00000489651 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.32
MED15-229ENST00000489651 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
MED15-229ENST00000489651 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
MED15-229ENST00000489651 MYT1Q01538 1121 aa16.98■□□□□ 0.31
MED15-229ENST00000489651 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
MED15-229ENST00000489651 KIF21BO75037 1637 aa16.92■□□□□ 0.3
MED15-229ENST00000489651 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
MED15-229ENST00000489651 ATP1B4Q9UN42 357 aaPredicted RBP16.9■□□□□ 0.3
MED15-229ENST00000489651 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
MED15-229ENST00000489651 DHX57Q6P158 1386 aaKnown RBP16.83■□□□□ 0.28
MED15-229ENST00000489651 FAM50AQ14320 339 aaKnown RBP16.78■□□□□ 0.28
MED15-229ENST00000489651 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
MED15-229ENST00000489651 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
MED15-229ENST00000489651 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
MED15-229ENST00000489651 SUPT16HQ9Y5B9 1047 aaKnown RBP16.72■□□□□ 0.27
MED15-229ENST00000489651 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
MED15-229ENST00000489651 ARAP1Q96P48 1450 aa16.71■□□□□ 0.26
MED15-229ENST00000489651 BCANQ96GW7 911 aa16.71■□□□□ 0.26
MED15-229ENST00000489651 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
MED15-229ENST00000489651 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
MED15-229ENST00000489651 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
MED15-229ENST00000489651 ERICH3Q5RHP9 1530 aa16.64■□□□□ 0.25
MED15-229ENST00000489651 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
MED15-229ENST00000489651 KCNH8Q96L42 1107 aa16.62■□□□□ 0.25
MED15-229ENST00000489651 NEFLP07196 543 aa16.62■□□□□ 0.25
MED15-229ENST00000489651 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
MED15-229ENST00000489651 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
MED15-229ENST00000489651 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
MED15-229ENST00000489651 CUX2O14529 1486 aa16.58■□□□□ 0.24
MED15-229ENST00000489651 CUX1P39880 1505 aa16.57■□□□□ 0.24
MED15-229ENST00000489651 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
MED15-229ENST00000489651 FKBP8Q14318 412 aa16.56■□□□□ 0.24
MED15-229ENST00000489651 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
MED15-229ENST00000489651 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
MED15-229ENST00000489651 ANP32CO43423 234 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms