RNA–Protein interactions for RNA: ENST00000557372.1

SEL1L-206, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-206ENST00000557372 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
SEL1L-206ENST00000557372 CCDC180Q9P1Z9 1646 aa34.82■■■■□ 3.16
SEL1L-206ENST00000557372 ABCC9O60706 1549 aa34.61■■■■□ 3.13
SEL1L-206ENST00000557372 DCAF8L2P0C7V8 631 aa33.06■■■□□ 2.88
SEL1L-206ENST00000557372 RB1CC1Q8TDY2 1594 aa33.04■■■□□ 2.88
SEL1L-206ENST00000557372 NACADO15069 1562 aa32.87■■■□□ 2.85
SEL1L-206ENST00000557372 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
SEL1L-206ENST00000557372 ZCCHC6Q5VYS8 1495 aaKnown RBP32.42■■■□□ 2.78
SEL1L-206ENST00000557372 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
SEL1L-206ENST00000557372 UNC13AQ9UPW8 1703 aa32.28■■■□□ 2.76
SEL1L-206ENST00000557372 DCAF1Q9Y4B6 1507 aa32.2■■■□□ 2.74
SEL1L-206ENST00000557372 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
SEL1L-206ENST00000557372 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
SEL1L-206ENST00000557372 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
SEL1L-206ENST00000557372 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
SEL1L-206ENST00000557372 EIF4G1Q04637 1599 aaKnown RBP31.23■■■□□ 2.59
SEL1L-206ENST00000557372 CC2D2AQ9P2K1 1620 aa31.23■■■□□ 2.59
SEL1L-206ENST00000557372 CECR2Q9BXF3 1484 aa31.11■■■□□ 2.57
SEL1L-206ENST00000557372 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
SEL1L-206ENST00000557372 NCAPD3P42695 1498 aa30.33■■■□□ 2.45
SEL1L-206ENST00000557372 ATAD2BQ9ULI0 1458 aa30.32■■■□□ 2.44
SEL1L-206ENST00000557372 BAZ1AQ9NRL2 1556 aaPredicted RBP30.28■■■□□ 2.44
SEL1L-206ENST00000557372 SMARCA2P51531 1590 aa30.26■■■□□ 2.43
SEL1L-206ENST00000557372 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
SEL1L-206ENST00000557372 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
SEL1L-206ENST00000557372 BAZ1BQ9UIG0 1483 aaKnown RBP30.09■■■□□ 2.41
SEL1L-206ENST00000557372 PEG3Q9GZU2 1588 aa30.01■■■□□ 2.39
SEL1L-206ENST00000557372 ERCC6Q03468 1493 aa29.88■■■□□ 2.37
SEL1L-206ENST00000557372 NESP48681 1621 aa29.82■■■□□ 2.36
SEL1L-206ENST00000557372 WIZO95785 1651 aa29.8■■■□□ 2.36
SEL1L-206ENST00000557372 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
SEL1L-206ENST00000557372 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
SEL1L-206ENST00000557372 CUX2O14529 1486 aa29.59■■■□□ 2.33
SEL1L-206ENST00000557372 CADPSQ9ULU8 1353 aa29.48■■■□□ 2.31
SEL1L-206ENST00000557372 PDS5BQ9NTI5 1447 aa29.47■■■□□ 2.31
SEL1L-206ENST00000557372 KIF21AQ7Z4S6 1674 aa29.42■■■□□ 2.3
SEL1L-206ENST00000557372 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
SEL1L-206ENST00000557372 THOC2Q8NI27 1593 aaKnown RBP29.36■■■□□ 2.29
SEL1L-206ENST00000557372 DNAJC5Q9H3Z4 198 aa29.21■■■□□ 2.27
SEL1L-206ENST00000557372 CFTRP13569 1480 aa29.18■■■□□ 2.26
SEL1L-206ENST00000557372 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
SEL1L-206ENST00000557372 FANCD2Q9BXW9 1451 aa29.17■■■□□ 2.26
SEL1L-206ENST00000557372 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
SEL1L-206ENST00000557372 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
SEL1L-206ENST00000557372 WDR62O43379 1518 aa29.04■■■□□ 2.24
SEL1L-206ENST00000557372 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
SEL1L-206ENST00000557372 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
SEL1L-206ENST00000557372 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
SEL1L-206ENST00000557372 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
SEL1L-206ENST00000557372 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
SEL1L-206ENST00000557372 DNMBPQ6XZF7 1577 aa28.54■■■□□ 2.16
SEL1L-206ENST00000557372 IFT140Q96RY7 1462 aa28.54■■■□□ 2.16
SEL1L-206ENST00000557372 ZNF608Q9ULD9 1512 aaPredicted RBP28.48■■■□□ 2.15
SEL1L-206ENST00000557372 OSCARQ8IYS5 282 aa28.4■■■□□ 2.14
SEL1L-206ENST00000557372 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
SEL1L-206ENST00000557372 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
SEL1L-206ENST00000557372 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
SEL1L-206ENST00000557372 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.12
SEL1L-206ENST00000557372 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
SEL1L-206ENST00000557372 SOGA1O94964 1423 aa28.29■■■□□ 2.12
SEL1L-206ENST00000557372 CUX1P39880 1505 aa28.28■■■□□ 2.12
SEL1L-206ENST00000557372 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
SEL1L-206ENST00000557372 TRIM41Q8WV44 630 aa28.24■■■□□ 2.11
SEL1L-206ENST00000557372 TDRD9Q8NDG6 1382 aaKnown RBP28.21■■■□□ 2.11
SEL1L-206ENST00000557372 FBLN2P98095 1184 aa28.16■■■□□ 2.1
SEL1L-206ENST00000557372 CHD1O14646 1710 aa28.06■■■□□ 2.08
SEL1L-206ENST00000557372 SNAPC4Q5SXM2 1469 aa28.01■■■□□ 2.07
SEL1L-206ENST00000557372 WDR97A6NE52 1622 aa28■■■□□ 2.07
SEL1L-206ENST00000557372 WRNQ14191 1432 aaPredicted RBP eCLIP27.97■■■□□ 2.07
SEL1L-206ENST00000557372 GRIN2BQ13224 1484 aa27.96■■■□□ 2.07
SEL1L-206ENST00000557372 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
SEL1L-206ENST00000557372 RIMBP3CA6NJZ7 1639 aa27.94■■■□□ 2.06
SEL1L-206ENST00000557372 RIMBP3BA6NNM3 1639 aa27.94■■■□□ 2.06
SEL1L-206ENST00000557372 RIMBP3Q9UFD9 1639 aa27.94■■■□□ 2.06
SEL1L-206ENST00000557372 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
SEL1L-206ENST00000557372 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
SEL1L-206ENST00000557372 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
SEL1L-206ENST00000557372 MAGI1Q96QZ7 1491 aaPredicted RBP27.9■■■□□ 2.06
SEL1L-206ENST00000557372 TOP2BQ02880 1626 aa27.9■■■□□ 2.06
SEL1L-206ENST00000557372 BIVM-ERCC5R4GMW8 1640 aa27.89■■■□□ 2.05
SEL1L-206ENST00000557372 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
SEL1L-206ENST00000557372 PBRM1Q86U86 1689 aa27.87■■■□□ 2.05
SEL1L-206ENST00000557372 ABCA5Q8WWZ7 1642 aa27.82■■■□□ 2.04
SEL1L-206ENST00000557372 SYNJ2O15056 1496 aa27.82■■■□□ 2.04
SEL1L-206ENST00000557372 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
SEL1L-206ENST00000557372 CLASP1Q7Z460 1538 aa27.69■■■□□ 2.02
SEL1L-206ENST00000557372 ARAP1Q96P48 1450 aa27.63■■■□□ 2.01
SEL1L-206ENST00000557372 ADAMTS12P58397 1594 aa27.61■■■□□ 2.01
SEL1L-206ENST00000557372 GRIN2AQ12879 1464 aa27.59■■■□□ 2.01
SEL1L-206ENST00000557372 FHAD1B1AJZ9 1412 aa27.58■■■□□ 2
SEL1L-206ENST00000557372 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
SEL1L-206ENST00000557372 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
SEL1L-206ENST00000557372 NUP160Q12769 1436 aa27.45■■□□□ 1.98
SEL1L-206ENST00000557372 KIF27Q86VH2 1401 aa27.41■■□□□ 1.98
SEL1L-206ENST00000557372 TRHP20396 242 aaPredicted RBP27.4■■□□□ 1.98
SEL1L-206ENST00000557372 ERCC6L2Q5T890 1561 aa27.35■■□□□ 1.97
SEL1L-206ENST00000557372 IGF1RP08069 1367 aa27.35■■□□□ 1.97
SEL1L-206ENST00000557372 JPH4Q96JJ6 628 aa27.28■■□□□ 1.96
SEL1L-206ENST00000557372 SHROOM2Q13796 1616 aa27.27■■□□□ 1.96
SEL1L-206ENST00000557372 CUL7Q14999 1698 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms