Protein–RNA interactions for Protein: P26599

PTBP1, Polypyrimidine tract-binding protein 1, humanhuman

Known RBP eCLIP

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1P26599 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.894e-9■■■□□ 17
PTBP1P26599 TMEM164-207ENST00000471255 418 ntTSL 313.23□□□□□ -0.292e-7■■■□□ 17
PTBP1P26599 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-7■■■□□ 17
PTBP1P26599 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.792e-7■■■□□ 17
PTBP1P26599 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.422e-7■■■□□ 17
PTBP1P26599 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.332e-7■■■□□ 17
PTBP1P26599 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.072e-7■■■□□ 17
PTBP1P26599 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.092e-7■■■□□ 17
PTBP1P26599 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.142e-7■■■□□ 17
PTBP1P26599 ZNF638-226ENST00000494621 871 ntTSL 313.91□□□□□ -0.182e-9■■■□□ 17
PTBP1P26599 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.22e-7■■■□□ 17
PTBP1P26599 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.362e-7■■■□□ 17
PTBP1P26599 AP3M1-204ENST00000487653 550 ntTSL 311.52□□□□□ -0.572e-7■■■□□ 17
PTBP1P26599 ZNF638-213ENST00000466330 746 ntTSL 311.21□□□□□ -0.612e-9■■■□□ 17
PTBP1P26599 ZNF638-216ENST00000475743 590 ntTSL 410.86□□□□□ -0.672e-9■■■□□ 17
PTBP1P26599 ZNF638-212ENST00000464375 626 ntTSL 310.84□□□□□ -0.672e-9■■■□□ 17
PTBP1P26599 MIATNB-209ENST00000450963 658 ntTSL 510.36□□□□□ -0.752e-7■■■□□ 17
PTBP1P26599 ZNF638-214ENST00000466975 560 ntTSL 410.14□□□□□ -0.792e-9■■■□□ 17
PTBP1P26599 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC9.82□□□□□ -0.842e-9■■■□□ 17
PTBP1P26599 C2CD3-204ENST00000414160 2431 ntAPPRIS ALT2 TSL 1 (best)9.6□□□□□ -0.872e-7■■■□□ 17
PTBP1P26599 EXOC4-202ENST00000393161 1604 ntTSL 5 BASIC9.54□□□□□ -0.888e-7■■■□□ 17
PTBP1P26599 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.932e-7■■■□□ 17
PTBP1P26599 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.992e-7■■■□□ 17
PTBP1P26599 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.992e-7■■■□□ 17
PTBP1P26599 MIATNB-205ENST00000440816 591 ntTSL 58.37□□□□□ -1.072e-7■■■□□ 17
PTBP1P26599 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.072e-7■■■□□ 17
PTBP1P26599 MIATNB-203ENST00000435162 760 ntTSL 28.29□□□□□ -1.082e-7■■■□□ 17
PTBP1P26599 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.112e-7■■■□□ 17
PTBP1P26599 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.112e-7■■■□□ 17
PTBP1P26599 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.122e-7■■■□□ 17
PTBP1P26599 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.157e-9■■■□□ 17
PTBP1P26599 EXOC4-205ENST00000462055 2364 ntTSL 1 (best)7.81□□□□□ -1.168e-7■■■□□ 17
PTBP1P26599 AC009948.5-201ENST00000624360 4406 ntBASIC7.57□□□□□ -1.27e-14■■■□□ 17
PTBP1P26599 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.22e-7■■■□□ 17
PTBP1P26599 MIATNB-207ENST00000446336 459 ntTSL 37.5□□□□□ -1.212e-7■■■□□ 17
PTBP1P26599 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.222e-7■■■□□ 17
PTBP1P26599 NUDCD3-204ENST00000464812 811 ntTSL 57.41□□□□□ -1.227e-8■■■□□ 17
PTBP1P26599 PHKB-210ENST00000566319 3080 ntTSL 27.2□□□□□ -1.262e-7■■■□□ 17
PTBP1P26599 HERC1-209ENST00000560519 591 ntTSL 37.16□□□□□ -1.262e-7■■■□□ 17
PTBP1P26599 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.83□□□□□ -1.327e-9■■■□□ 17
PTBP1P26599 DNAJB11-204ENST00000495390 4079 ntTSL 26.64□□□□□ -1.352e-7■■■□□ 17
PTBP1P26599 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC6.54□□□□□ -1.362e-7■■■□□ 17
PTBP1P26599 HERPUD2-203ENST00000413517 808 ntTSL 56.47□□□□□ -1.372e-7■■■□□ 17
PTBP1P26599 HERPUD2-206ENST00000438224 811 ntTSL 36.47□□□□□ -1.372e-7■■■□□ 17
PTBP1P26599 PGBD2-203ENST00000462488 282 ntTSL 56.39□□□□□ -1.392e-7■■■□□ 17
PTBP1P26599 PHKB-209ENST00000566275 1375 ntTSL 36.33□□□□□ -1.42e-7■■■□□ 17
PTBP1P26599 CSMD1-201ENST00000335551 12134 ntTSL 1 (best)5.84□□□□□ -1.472e-7■■■□□ 17
PTBP1P26599 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.548e-9■■■□□ 17
PTBP1P26599 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.562e-7■■■□□ 17
PTBP1P26599 CRTAP-203ENST00000485310 562 ntTSL 44.7□□□□□ -1.662e-7■■■□□ 17
PTBP1P26599 HERPUD2-204ENST00000426180 757 ntTSL 54.58□□□□□ -1.682e-7■■■□□ 17
PTBP1P26599 CFDP1-208ENST00000569341 454 ntTSL 33.94□□□□□ -1.781e-8■■■□□ 17
PTBP1P26599 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.798e-9■■■□□ 17
PTBP1P26599 CFDP1-211ENST00000612761 395 ntTSL 32.9□□□□□ -1.951e-8■■■□□ 17
PTBP1P26599 C2CD3-214ENST00000540057 556 ntTSL 42.66□□□□□ -1.982e-7■■■□□ 17
PTBP1P26599 LTBP4-217ENST00000597151 285 ntTSL 211.46□□□□□ -0.572e-7■■■□□ 17
PTBP1P26599 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.055e-7■■■□□ 17
PTBP1P26599 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.915e-7■■■□□ 17
PTBP1P26599 E2F5-201ENST00000256117 5042 ntTSL 57.11□□□□□ -1.275e-7■■■□□ 17
PTBP1P26599 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4□□□□□ -1.775e-7■■■□□ 17
PTBP1P26599 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.53□□□□□ -2.165e-7■■■□□ 17
PTBP1P26599 SLC7A6-211ENST00000566834 573 ntTSL 56□□□□□ -1.459e-8■■■□□ 17
PTBP1P26599 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.061e-6■■■□□ 17
PTBP1P26599 SPG11-213ENST00000558988 620 ntAPPRIS ALT2 TSL 35.46□□□□□ -1.543e-11■■■□□ 17
PTBP1P26599 SPG11-218ENST00000559754 411 ntAPPRIS ALT2 TSL 53.01□□□□□ -1.933e-11■■■□□ 17
PTBP1P26599 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.523e-6■■■□□ 17
PTBP1P26599 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.493e-6■■■□□ 17
PTBP1P26599 CLINT1-210ENST00000530742 3344 ntTSL 5 BASIC11.73□□□□□ -0.533e-6■■■□□ 17
PTBP1P26599 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC11.7□□□□□ -0.543e-6■■■□□ 17
PTBP1P26599 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.49□□□□□ -0.096e-13■■■□□ 17
PTBP1P26599 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.166e-13■■■□□ 17
PTBP1P26599 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.546e-13■■■□□ 17
PTBP1P26599 APAF1-206ENST00000547666 1596 ntTSL 56.43□□□□□ -1.386e-13■■■□□ 17
PTBP1P26599 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.646e-13■■■□□ 17
PTBP1P26599 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.571e-54■■■□□ 17
PTBP1P26599 SCARNA7-201ENST00000458797 330 ntBASIC7.64□□□□□ -1.191e-54■■■□□ 17
PTBP1P26599 KPNA4-203ENST00000483437 510 ntTSL 53.12□□□□□ -1.911e-54■■■□□ 17
PTBP1P26599 ATP11A-205ENST00000419448 435 ntTSL 36.12□□□□□ -1.434e-7■■■□□ 17
PTBP1P26599 UBA6-204ENST00000505673 812 ntTSL 53.54□□□□□ -1.846e-7■■■□□ 17
PTBP1P26599 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.54□□□□□ -0.721e-7■■■□□ 17
PTBP1P26599 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.911e-7■■■□□ 17
PTBP1P26599 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.11e-7■■■□□ 17
PTBP1P26599 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.85□□□□□ -1.151e-7■■■□□ 17
PTBP1P26599 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.07□□□□□ -1.281e-7■■■□□ 17
PTBP1P26599 PUM1-214ENST00000525843 4528 ntTSL 56.66□□□□□ -1.341e-7■■■□□ 17
PTBP1P26599 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.56□□□□□ -1.521e-7■■■□□ 17
PTBP1P26599 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.581e-7■■■□□ 17
PTBP1P26599 C15orf38-AP3S2-204ENST00000560224 659 ntTSL 212.2□□□□□ -0.463e-7■■■□□ 17
PTBP1P26599 AP3S2-211ENST00000560184 601 ntTSL 33.72□□□□□ -1.813e-7■■■□□ 17
PTBP1P26599 AP3S2-212ENST00000560251 573 ntTSL 43.48□□□□□ -1.853e-7■■■□□ 17
PTBP1P26599 MICALL2-204ENST00000467394 2080 ntTSL 218.35■□□□□ 0.533e-6■■■□□ 17
PTBP1P26599 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.072e-8■■■□□ 17
PTBP1P26599 TPM1-224ENST00000560615 570 ntTSL 313.91□□□□□ -0.187e-7■■■□□ 17
PTBP1P26599 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.64□□□□□ -0.237e-7■■■□□ 17
PTBP1P26599 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.43□□□□□ -0.267e-7■■■□□ 17
PTBP1P26599 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.567e-7■■■□□ 17
PTBP1P26599 TPM1-230ENST00000561266 671 ntTSL 310.71□□□□□ -0.697e-7■■■□□ 17
PTBP1P26599 TPM1-223ENST00000560445 485 ntTSL 3 BASIC10.68□□□□□ -0.77e-7■■■□□ 17
PTBP1P26599 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC10.54□□□□□ -0.727e-7■■■□□ 17
PTBP1P26599 TPM1-221ENST00000559831 573 ntTSL 58.71□□□□□ -1.027e-7■■■□□ 17
Retrieved 100 of 27,725 protein–RNA pairs in 191.1 ms