RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
C2CD3-214ENST00000540057 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
C2CD3-214ENST00000540057 SENP3Q9H4L4 574 aaPredicted RBP15.82■□□□□ 0.12
C2CD3-214ENST00000540057 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
C2CD3-214ENST00000540057 FOXD1Q16676 465 aa14.77□□□□□ -0.05
C2CD3-214ENST00000540057 PLPPR3Q6T4P5 718 aa14.24□□□□□ -0.13
C2CD3-214ENST00000540057 PPP6R1Q9UPN7 881 aa13.93□□□□□ -0.18
C2CD3-214ENST00000540057 ADRA2BP18089 450 aa13.87□□□□□ -0.19
C2CD3-214ENST00000540057 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
C2CD3-214ENST00000540057 MSH5O43196 834 aa13.71□□□□□ -0.21
C2CD3-214ENST00000540057 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
C2CD3-214ENST00000540057 MAPK8IP2Q13387 824 aaPredicted RBP12.7□□□□□ -0.38
C2CD3-214ENST00000540057 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
C2CD3-214ENST00000540057 SCAF1Q9H7N4 1312 aaKnown RBP12.59□□□□□ -0.39
C2CD3-214ENST00000540057 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
C2CD3-214ENST00000540057 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
C2CD3-214ENST00000540057 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
C2CD3-214ENST00000540057 RNF216Q9NWF9 866 aaPredicted RBP12.11□□□□□ -0.47
C2CD3-214ENST00000540057 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
C2CD3-214ENST00000540057 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
C2CD3-214ENST00000540057 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
C2CD3-214ENST00000540057 KCNA4P22459 653 aa11.83□□□□□ -0.52
C2CD3-214ENST00000540057 RNF39Q9H2S5 420 aa11.75□□□□□ -0.53
C2CD3-214ENST00000540057 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
C2CD3-214ENST00000540057 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
C2CD3-214ENST00000540057 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
C2CD3-214ENST00000540057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.56
C2CD3-214ENST00000540057 U3KPZ7 1027 aaPredicted RBP11.4□□□□□ -0.58
C2CD3-214ENST00000540057 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
C2CD3-214ENST00000540057 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-214ENST00000540057 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
C2CD3-214ENST00000540057 CAPN15O75808 1086 aa11.08□□□□□ -0.64
C2CD3-214ENST00000540057 DSG3P32926 999 aa11.05□□□□□ -0.64
C2CD3-214ENST00000540057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
C2CD3-214ENST00000540057 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
C2CD3-214ENST00000540057 MYCNP04198 464 aaPredicted RBP11.01□□□□□ -0.65
C2CD3-214ENST00000540057 SAMD1Q6SPF0 538 aaPredicted RBP10.99□□□□□ -0.65
C2CD3-214ENST00000540057 APLP2Q06481 763 aa10.97□□□□□ -0.65
C2CD3-214ENST00000540057 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
C2CD3-214ENST00000540057 TRHP20396 242 aaPredicted RBP10.95□□□□□ -0.66
C2CD3-214ENST00000540057 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
C2CD3-214ENST00000540057 ZBTB22O15209 634 aa10.92□□□□□ -0.66
C2CD3-214ENST00000540057 ABCB7O75027 752 aa10.88□□□□□ -0.67
C2CD3-214ENST00000540057 ATF5Q9Y2D1 282 aaPredicted RBP10.79□□□□□ -0.68
C2CD3-214ENST00000540057 POLA2Q14181 598 aa10.69□□□□□ -0.7
C2CD3-214ENST00000540057 ATXN8OSP0DMR3 200 aa10.61□□□□□ -0.71
C2CD3-214ENST00000540057 CSRNP3Q8WYN3 585 aa10.51□□□□□ -0.73
C2CD3-214ENST00000540057 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
C2CD3-214ENST00000540057 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-214ENST00000540057 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
C2CD3-214ENST00000540057 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
C2CD3-214ENST00000540057 POTEHQ6S545 545 aa10.34□□□□□ -0.75
C2CD3-214ENST00000540057 MKRN4PQ13434 485 aaPredicted RBP10.31□□□□□ -0.76
C2CD3-214ENST00000540057 AKT1S1Q96B36 256 aa10.3□□□□□ -0.76
C2CD3-214ENST00000540057 FBLN2P98095 1184 aa10.27□□□□□ -0.77
C2CD3-214ENST00000540057 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
C2CD3-214ENST00000540057 REM2Q8IYK8 340 aaPredicted RBP10.22□□□□□ -0.77
C2CD3-214ENST00000540057 NISCHQ9Y2I1 1504 aa10.21□□□□□ -0.78
C2CD3-214ENST00000540057 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
C2CD3-214ENST00000540057 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
C2CD3-214ENST00000540057 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
C2CD3-214ENST00000540057 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
C2CD3-214ENST00000540057 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
C2CD3-214ENST00000540057 ZNF692Q9BU19 519 aaPredicted RBP10.05□□□□□ -0.8
C2CD3-214ENST00000540057 PIP4P2Q8N4L2 257 aa10.04□□□□□ -0.8
C2CD3-214ENST00000540057 FXR2P51116 673 aaKnown RBP eCLIP10.01□□□□□ -0.81
C2CD3-214ENST00000540057 SPDYE1Q8NFV5 336 aaPredicted RBP9.96□□□□□ -0.82
C2CD3-214ENST00000540057 PABPN1Q86U42 306 aaKnown RBP eCLIP9.94□□□□□ -0.82
C2CD3-214ENST00000540057 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
C2CD3-214ENST00000540057 PRKAR2AP13861 404 aaKnown RBP9.83□□□□□ -0.84
C2CD3-214ENST00000540057 SPDYE4A6NLX3 237 aa9.82□□□□□ -0.84
C2CD3-214ENST00000540057 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
C2CD3-214ENST00000540057 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
C2CD3-214ENST00000540057 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
C2CD3-214ENST00000540057 HAX1O00165 279 aa9.75□□□□□ -0.85
C2CD3-214ENST00000540057 EVX2Q03828 476 aa9.73□□□□□ -0.85
C2CD3-214ENST00000540057 ABCC9O60706 1549 aa9.7□□□□□ -0.86
C2CD3-214ENST00000540057 PROM2Q8N271 834 aa9.69□□□□□ -0.86
C2CD3-214ENST00000540057 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
C2CD3-214ENST00000540057 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
C2CD3-214ENST00000540057 CREBZFQ9NS37 354 aa9.63□□□□□ -0.87
C2CD3-214ENST00000540057 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
C2CD3-214ENST00000540057 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
C2CD3-214ENST00000540057 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
C2CD3-214ENST00000540057 GABBR2O75899 941 aa9.48□□□□□ -0.89
C2CD3-214ENST00000540057 FKBP8Q14318 412 aa9.48□□□□□ -0.89
C2CD3-214ENST00000540057 ZNF579Q8NAF0 562 aaKnown RBP9.41□□□□□ -0.9
C2CD3-214ENST00000540057 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
C2CD3-214ENST00000540057 NPM1P06748 294 aaKnown RBP eCLIP9.38□□□□□ -0.91
C2CD3-214ENST00000540057 POTEIP0CG38 1075 aa9.33□□□□□ -0.92
C2CD3-214ENST00000540057 CLCN6P51797 869 aa9.33□□□□□ -0.92
C2CD3-214ENST00000540057 PHF12Q96QT6 1004 aa9.33□□□□□ -0.92
C2CD3-214ENST00000540057 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
C2CD3-214ENST00000540057 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
C2CD3-214ENST00000540057 MIER1Q8N108 512 aa9.3□□□□□ -0.92
C2CD3-214ENST00000540057 GALR2O43603 387 aaPredicted RBP9.29□□□□□ -0.92
C2CD3-214ENST00000540057 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
C2CD3-214ENST00000540057 PLEKHG5O94827 1062 aa9.25□□□□□ -0.93
C2CD3-214ENST00000540057 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
C2CD3-214ENST00000540057 RASEFQ8IZ41 740 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms