RNA–Protein interactions for RNA: ENST00000560251.1

AP3S2-212, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-212ENST00000560251 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
AP3S2-212ENST00000560251 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
AP3S2-212ENST00000560251 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
AP3S2-212ENST00000560251 SENP3Q9H4L4 574 aaPredicted RBP16■□□□□ 0.15
AP3S2-212ENST00000560251 PLPPR3Q6T4P5 718 aa15.33■□□□□ 0.04
AP3S2-212ENST00000560251 FOXD1Q16676 465 aa14.78□□□□□ -0.04
AP3S2-212ENST00000560251 ADRA2BP18089 450 aa14.44□□□□□ -0.1
AP3S2-212ENST00000560251 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
AP3S2-212ENST00000560251 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
AP3S2-212ENST00000560251 MSH5O43196 834 aa13.56□□□□□ -0.24
AP3S2-212ENST00000560251 KCNA4P22459 653 aa13.52□□□□□ -0.25
AP3S2-212ENST00000560251 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
AP3S2-212ENST00000560251 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
AP3S2-212ENST00000560251 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
AP3S2-212ENST00000560251 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
AP3S2-212ENST00000560251 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
AP3S2-212ENST00000560251 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
AP3S2-212ENST00000560251 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
AP3S2-212ENST00000560251 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
AP3S2-212ENST00000560251 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
AP3S2-212ENST00000560251 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
AP3S2-212ENST00000560251 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
AP3S2-212ENST00000560251 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
AP3S2-212ENST00000560251 CSRNP3Q8WYN3 585 aa12.58□□□□□ -0.4
AP3S2-212ENST00000560251 ZBTB22O15209 634 aa12.43□□□□□ -0.42
AP3S2-212ENST00000560251 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
AP3S2-212ENST00000560251 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
AP3S2-212ENST00000560251 DCAF8L1A6NGE4 600 aa12.23□□□□□ -0.45
AP3S2-212ENST00000560251 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
AP3S2-212ENST00000560251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.48
AP3S2-212ENST00000560251 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
AP3S2-212ENST00000560251 U3KPZ7 1027 aaPredicted RBP11.89□□□□□ -0.51
AP3S2-212ENST00000560251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.85□□□□□ -0.51
AP3S2-212ENST00000560251 HNRNPUL2Q1KMD3 747 aaKnown RBP11.85□□□□□ -0.51
AP3S2-212ENST00000560251 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
AP3S2-212ENST00000560251 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
AP3S2-212ENST00000560251 ATF5Q9Y2D1 282 aaPredicted RBP11.69□□□□□ -0.54
AP3S2-212ENST00000560251 APLP2Q06481 763 aa11.67□□□□□ -0.54
AP3S2-212ENST00000560251 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
AP3S2-212ENST00000560251 C1QBPQ07021 282 aaKnown RBP11.52□□□□□ -0.57
AP3S2-212ENST00000560251 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
AP3S2-212ENST00000560251 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
AP3S2-212ENST00000560251 CAPN15O75808 1086 aa11.42□□□□□ -0.58
AP3S2-212ENST00000560251 TRHP20396 242 aaPredicted RBP11.42□□□□□ -0.58
AP3S2-212ENST00000560251 FKBP8Q14318 412 aa11.37□□□□□ -0.59
AP3S2-212ENST00000560251 POLA2Q14181 598 aa11.28□□□□□ -0.6
AP3S2-212ENST00000560251 FBLN2P98095 1184 aa11.23□□□□□ -0.61
AP3S2-212ENST00000560251 ABCB7O75027 752 aa11.22□□□□□ -0.61
AP3S2-212ENST00000560251 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
AP3S2-212ENST00000560251 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
AP3S2-212ENST00000560251 DSG3P32926 999 aa11.16□□□□□ -0.62
AP3S2-212ENST00000560251 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
AP3S2-212ENST00000560251 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
AP3S2-212ENST00000560251 PROM2Q8N271 834 aa10.97□□□□□ -0.65
AP3S2-212ENST00000560251 OSCARQ8IYS5 282 aa10.93□□□□□ -0.66
AP3S2-212ENST00000560251 FBXO3Q9UK99 471 aa10.91□□□□□ -0.66
AP3S2-212ENST00000560251 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
AP3S2-212ENST00000560251 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
AP3S2-212ENST00000560251 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
AP3S2-212ENST00000560251 AMER1Q5JTC6 1135 aaPredicted RBP10.87□□□□□ -0.67
AP3S2-212ENST00000560251 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
AP3S2-212ENST00000560251 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
AP3S2-212ENST00000560251 RTN4Q9NQC3 1192 aaKnown RBP10.81□□□□□ -0.68
AP3S2-212ENST00000560251 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
AP3S2-212ENST00000560251 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
AP3S2-212ENST00000560251 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
AP3S2-212ENST00000560251 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
AP3S2-212ENST00000560251 IFNLR1Q8IU57 520 aaPredicted RBP10.6□□□□□ -0.71
AP3S2-212ENST00000560251 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
AP3S2-212ENST00000560251 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
AP3S2-212ENST00000560251 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
AP3S2-212ENST00000560251 MIER1Q8N108 512 aa10.48□□□□□ -0.73
AP3S2-212ENST00000560251 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
AP3S2-212ENST00000560251 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
AP3S2-212ENST00000560251 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
AP3S2-212ENST00000560251 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
AP3S2-212ENST00000560251 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
AP3S2-212ENST00000560251 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
AP3S2-212ENST00000560251 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
AP3S2-212ENST00000560251 PKD2Q13563 968 aa10.36□□□□□ -0.75
AP3S2-212ENST00000560251 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
AP3S2-212ENST00000560251 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
AP3S2-212ENST00000560251 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
AP3S2-212ENST00000560251 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
AP3S2-212ENST00000560251 SLC24A1O60721 1099 aa10.23□□□□□ -0.77
AP3S2-212ENST00000560251 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
AP3S2-212ENST00000560251 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
AP3S2-212ENST00000560251 NUBP1P53384 320 aa10.2□□□□□ -0.78
AP3S2-212ENST00000560251 GSE1Q14687 1217 aa10.18□□□□□ -0.78
AP3S2-212ENST00000560251 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
AP3S2-212ENST00000560251 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
AP3S2-212ENST00000560251 RGL2O15211 777 aa10.14□□□□□ -0.79
AP3S2-212ENST00000560251 FAM212AQ96EL1 285 aa10.14□□□□□ -0.79
AP3S2-212ENST00000560251 DCAF8Q5TAQ9 597 aa10.12□□□□□ -0.79
AP3S2-212ENST00000560251 CHADLQ6NUI6 762 aa10.12□□□□□ -0.79
AP3S2-212ENST00000560251 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
AP3S2-212ENST00000560251 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
AP3S2-212ENST00000560251 CHRDL2Q6WN34 429 aa10.08□□□□□ -0.8
AP3S2-212ENST00000560251 NISCHQ9Y2I1 1504 aa10.07□□□□□ -0.8
AP3S2-212ENST00000560251 PRKAR2AP13861 404 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms