RNA–Protein interactions for RNA: ENST00000485310.1

CRTAP-203, Transcript of cartilage associated protein, humanhuman

TSL 4

Gene CRTAP, Length 562 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAP-203ENST00000485310 NISCHQ9Y2I1 1504 aa14.31□□□□□ -0.12
CRTAP-203ENST00000485310 ABCC9O60706 1549 aa14.2□□□□□ -0.14
CRTAP-203ENST00000485310 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
CRTAP-203ENST00000485310 DNAJC5Q9H3Z4 198 aa13.57□□□□□ -0.24
CRTAP-203ENST00000485310 AEBP2Q6ZN18 517 aaPredicted RBP13.43□□□□□ -0.26
CRTAP-203ENST00000485310 CCDC180Q9P1Z9 1646 aa13.21□□□□□ -0.29
CRTAP-203ENST00000485310 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
CRTAP-203ENST00000485310 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
CRTAP-203ENST00000485310 CHIC1Q5VXU3 224 aa12.93□□□□□ -0.34
CRTAP-203ENST00000485310 CECR2Q9BXF3 1484 aa12.85□□□□□ -0.35
CRTAP-203ENST00000485310 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
CRTAP-203ENST00000485310 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
CRTAP-203ENST00000485310 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
CRTAP-203ENST00000485310 NACADO15069 1562 aa12.69□□□□□ -0.38
CRTAP-203ENST00000485310 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
CRTAP-203ENST00000485310 CUX2O14529 1486 aa12.53□□□□□ -0.4
CRTAP-203ENST00000485310 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
CRTAP-203ENST00000485310 EIF4G1Q04637 1599 aaKnown RBP12.5□□□□□ -0.41
CRTAP-203ENST00000485310 SHROOM4Q9ULL8 1493 aa12.35□□□□□ -0.43
CRTAP-203ENST00000485310 ERCC6Q03468 1493 aa12.26□□□□□ -0.45
CRTAP-203ENST00000485310 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
CRTAP-203ENST00000485310 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
CRTAP-203ENST00000485310 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
CRTAP-203ENST00000485310 NESP48681 1621 aa11.97□□□□□ -0.49
CRTAP-203ENST00000485310 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
CRTAP-203ENST00000485310 BAZ1AQ9NRL2 1556 aaPredicted RBP11.85□□□□□ -0.51
CRTAP-203ENST00000485310 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
CRTAP-203ENST00000485310 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
CRTAP-203ENST00000485310 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
CRTAP-203ENST00000485310 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
CRTAP-203ENST00000485310 OSCARQ8IYS5 282 aa11.81□□□□□ -0.52
CRTAP-203ENST00000485310 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.53
CRTAP-203ENST00000485310 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
CRTAP-203ENST00000485310 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
CRTAP-203ENST00000485310 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
CRTAP-203ENST00000485310 ZCCHC6Q5VYS8 1495 aaKnown RBP11.7□□□□□ -0.54
CRTAP-203ENST00000485310 ARHGEF11O15085 1522 aa11.69□□□□□ -0.54
CRTAP-203ENST00000485310 CYB5RLQ6IPT4 315 aa11.62□□□□□ -0.55
CRTAP-203ENST00000485310 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
CRTAP-203ENST00000485310 LAMC3Q9Y6N6 1575 aa11.62□□□□□ -0.55
CRTAP-203ENST00000485310 WDR62O43379 1518 aa11.6□□□□□ -0.55
CRTAP-203ENST00000485310 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
CRTAP-203ENST00000485310 MRC2Q9UBG0 1479 aa11.57□□□□□ -0.56
CRTAP-203ENST00000485310 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
CRTAP-203ENST00000485310 ARAP1Q96P48 1450 aa11.55□□□□□ -0.56
CRTAP-203ENST00000485310 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
CRTAP-203ENST00000485310 SENP3Q9H4L4 574 aaPredicted RBP11.4□□□□□ -0.58
CRTAP-203ENST00000485310 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
CRTAP-203ENST00000485310 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
CRTAP-203ENST00000485310 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.6
CRTAP-203ENST00000485310 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
CRTAP-203ENST00000485310 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
CRTAP-203ENST00000485310 URB2Q14146 1524 aaKnown RBP11.27□□□□□ -0.61
CRTAP-203ENST00000485310 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
CRTAP-203ENST00000485310 CHD1O14646 1710 aa11.25□□□□□ -0.61
CRTAP-203ENST00000485310 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
CRTAP-203ENST00000485310 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
CRTAP-203ENST00000485310 KDM4FA0A1W2PPD8 638 aa11.24□□□□□ -0.61
CRTAP-203ENST00000485310 EIF4G3O43432 1585 aaKnown RBP11.16□□□□□ -0.62
CRTAP-203ENST00000485310 LMTK3Q96Q04 1460 aa11.14□□□□□ -0.63
CRTAP-203ENST00000485310 FBLN2P98095 1184 aa11.12□□□□□ -0.63
CRTAP-203ENST00000485310 IFT140Q96RY7 1462 aa11.12□□□□□ -0.63
CRTAP-203ENST00000485310 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
CRTAP-203ENST00000485310 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
CRTAP-203ENST00000485310 CLASP1Q7Z460 1538 aa11.1□□□□□ -0.63
CRTAP-203ENST00000485310 HECW2Q9P2P5 1572 aa11.1□□□□□ -0.63
CRTAP-203ENST00000485310 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
CRTAP-203ENST00000485310 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
CRTAP-203ENST00000485310 SOCS7O14512 581 aa11.05□□□□□ -0.64
CRTAP-203ENST00000485310 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
CRTAP-203ENST00000485310 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
CRTAP-203ENST00000485310 CFTRP13569 1480 aa11.04□□□□□ -0.64
CRTAP-203ENST00000485310 GAPVD1Q14C86 1478 aa11.02□□□□□ -0.65
CRTAP-203ENST00000485310 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
CRTAP-203ENST00000485310 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
CRTAP-203ENST00000485310 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
CRTAP-203ENST00000485310 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
CRTAP-203ENST00000485310 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
CRTAP-203ENST00000485310 KDM6BO15054 1643 aa10.91□□□□□ -0.66
CRTAP-203ENST00000485310 SNAPC4Q5SXM2 1469 aa10.91□□□□□ -0.66
CRTAP-203ENST00000485310 WIZO95785 1651 aa10.9□□□□□ -0.66
CRTAP-203ENST00000485310 DISP3Q9P2K9 1392 aa10.88□□□□□ -0.67
CRTAP-203ENST00000485310 CHMP7Q8WUX9 453 aaPredicted RBP10.87□□□□□ -0.67
CRTAP-203ENST00000485310 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
CRTAP-203ENST00000485310 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
CRTAP-203ENST00000485310 TDRD9Q8NDG6 1382 aaKnown RBP10.81□□□□□ -0.68
CRTAP-203ENST00000485310 DNMBPQ6XZF7 1577 aa10.81□□□□□ -0.68
CRTAP-203ENST00000485310 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
CRTAP-203ENST00000485310 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
CRTAP-203ENST00000485310 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
CRTAP-203ENST00000485310 RAD54L2Q9Y4B4 1467 aa10.79□□□□□ -0.68
CRTAP-203ENST00000485310 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
CRTAP-203ENST00000485310 TSPOAP1O95153 1857 aa10.76□□□□□ -0.69
CRTAP-203ENST00000485310 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
CRTAP-203ENST00000485310 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
CRTAP-203ENST00000485310 SPATA31D1Q6ZQQ2 1576 aa10.73□□□□□ -0.69
CRTAP-203ENST00000485310 MAPKBP1O60336 1514 aa10.68□□□□□ -0.7
CRTAP-203ENST00000485310 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
CRTAP-203ENST00000485310 SOGA1O94964 1423 aa10.67□□□□□ -0.7
CRTAP-203ENST00000485310 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms