RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
PGBD2-201ENST00000329291 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
PGBD2-201ENST00000329291 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.29
PGBD2-201ENST00000329291 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
PGBD2-201ENST00000329291 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
PGBD2-201ENST00000329291 DCAF1Q9Y4B6 1507 aa28.87■■■□□ 2.21
PGBD2-201ENST00000329291 ABCC9O60706 1549 aa28.59■■■□□ 2.17
PGBD2-201ENST00000329291 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
PGBD2-201ENST00000329291 NACADO15069 1562 aa28.25■■■□□ 2.11
PGBD2-201ENST00000329291 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
PGBD2-201ENST00000329291 SCRIBQ14160 1630 aa27.99■■■□□ 2.07
PGBD2-201ENST00000329291 RB1CC1Q8TDY2 1594 aa27.98■■■□□ 2.07
PGBD2-201ENST00000329291 UNC13AQ9UPW8 1703 aa27.37■■□□□ 1.97
PGBD2-201ENST00000329291 RSF1Q96T23 1441 aaPredicted RBP27.31■■□□□ 1.96
PGBD2-201ENST00000329291 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
PGBD2-201ENST00000329291 CHIC1Q5VXU3 224 aa27.13■■□□□ 1.93
PGBD2-201ENST00000329291 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
PGBD2-201ENST00000329291 MROH2BQ7Z745 1585 aa27.04■■□□□ 1.92
PGBD2-201ENST00000329291 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
PGBD2-201ENST00000329291 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
PGBD2-201ENST00000329291 WIZO95785 1651 aa26.82■■□□□ 1.88
PGBD2-201ENST00000329291 SMARCA4P51532 1647 aa26.82■■□□□ 1.88
PGBD2-201ENST00000329291 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
PGBD2-201ENST00000329291 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
PGBD2-201ENST00000329291 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
PGBD2-201ENST00000329291 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
PGBD2-201ENST00000329291 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
PGBD2-201ENST00000329291 CCDC88BA6NC98 1476 aa26.32■■□□□ 1.8
PGBD2-201ENST00000329291 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
PGBD2-201ENST00000329291 LOC105371045A0A1W2PR82 267 aa26.25■■□□□ 1.79
PGBD2-201ENST00000329291 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
PGBD2-201ENST00000329291 NCAPD3P42695 1498 aa26.07■■□□□ 1.76
PGBD2-201ENST00000329291 HMGXB3Q12766 1538 aa26.05■■□□□ 1.76
PGBD2-201ENST00000329291 FAM9AQ8IZU1 332 aaPredicted RBP26.02■■□□□ 1.76
PGBD2-201ENST00000329291 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
PGBD2-201ENST00000329291 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
PGBD2-201ENST00000329291 EHMT2Q96KQ7 1210 aa25.75■■□□□ 1.71
PGBD2-201ENST00000329291 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
PGBD2-201ENST00000329291 SOGA1O94964 1423 aa25.6■■□□□ 1.69
PGBD2-201ENST00000329291 CFTRP13569 1480 aa25.55■■□□□ 1.68
PGBD2-201ENST00000329291 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
PGBD2-201ENST00000329291 RUSC2Q8N2Y8 1516 aa25.51■■□□□ 1.67
PGBD2-201ENST00000329291 CADPSQ9ULU8 1353 aa25.44■■□□□ 1.66
PGBD2-201ENST00000329291 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
PGBD2-201ENST00000329291 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
PGBD2-201ENST00000329291 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
PGBD2-201ENST00000329291 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
PGBD2-201ENST00000329291 EEA1Q15075 1411 aa25.35■■□□□ 1.65
PGBD2-201ENST00000329291 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
PGBD2-201ENST00000329291 CUX1P39880 1505 aa25.24■■□□□ 1.63
PGBD2-201ENST00000329291 TRIM26Q12899 539 aaPredicted RBP25.18■■□□□ 1.62
PGBD2-201ENST00000329291 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
PGBD2-201ENST00000329291 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
PGBD2-201ENST00000329291 FANCD2Q9BXW9 1451 aa25.16■■□□□ 1.62
PGBD2-201ENST00000329291 UBTFP17480 764 aaKnown RBP25.15■■□□□ 1.62
PGBD2-201ENST00000329291 NESP48681 1621 aa25.14■■□□□ 1.61
PGBD2-201ENST00000329291 DNAJC5BQ9UF47 199 aa25.12■■□□□ 1.61
PGBD2-201ENST00000329291 GOLGA3Q08378 1498 aa25.11■■□□□ 1.61
PGBD2-201ENST00000329291 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
PGBD2-201ENST00000329291 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
PGBD2-201ENST00000329291 PPARGC1BQ86YN6 1023 aaKnown RBP25.04■■□□□ 1.6
PGBD2-201ENST00000329291 KIF21BO75037 1637 aa25.03■■□□□ 1.6
PGBD2-201ENST00000329291 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
PGBD2-201ENST00000329291 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
PGBD2-201ENST00000329291 HRCP23327 699 aa24.98■■□□□ 1.59
PGBD2-201ENST00000329291 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
PGBD2-201ENST00000329291 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
PGBD2-201ENST00000329291 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
PGBD2-201ENST00000329291 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
PGBD2-201ENST00000329291 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
PGBD2-201ENST00000329291 CUX2O14529 1486 aa24.84■■□□□ 1.57
PGBD2-201ENST00000329291 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.56
PGBD2-201ENST00000329291 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
PGBD2-201ENST00000329291 CLIP1P30622 1438 aa24.8■■□□□ 1.56
PGBD2-201ENST00000329291 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
PGBD2-201ENST00000329291 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
PGBD2-201ENST00000329291 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
PGBD2-201ENST00000329291 IGF1RP08069 1367 aa24.76■■□□□ 1.55
PGBD2-201ENST00000329291 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
PGBD2-201ENST00000329291 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
PGBD2-201ENST00000329291 TTBK1Q5TCY1 1321 aaPredicted RBP24.72■■□□□ 1.55
PGBD2-201ENST00000329291 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
PGBD2-201ENST00000329291 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
PGBD2-201ENST00000329291 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
PGBD2-201ENST00000329291 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
PGBD2-201ENST00000329291 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
PGBD2-201ENST00000329291 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
PGBD2-201ENST00000329291 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
PGBD2-201ENST00000329291 WDR62O43379 1518 aa24.49■■□□□ 1.51
PGBD2-201ENST00000329291 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
PGBD2-201ENST00000329291 CUL7Q14999 1698 aa24.48■■□□□ 1.51
PGBD2-201ENST00000329291 TDRD9Q8NDG6 1382 aaKnown RBP24.48■■□□□ 1.51
PGBD2-201ENST00000329291 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
PGBD2-201ENST00000329291 ARHGAP35Q9NRY4 1499 aa24.43■■□□□ 1.5
PGBD2-201ENST00000329291 APLP2Q06481 763 aa24.39■■□□□ 1.49
PGBD2-201ENST00000329291 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
PGBD2-201ENST00000329291 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
PGBD2-201ENST00000329291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
PGBD2-201ENST00000329291 KANK4Q5T7N3 995 aaPredicted RBP24.29■■□□□ 1.48
PGBD2-201ENST00000329291 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms