RNA–Protein interactions for RNA: ENST00000483437.1

KPNA4-203, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 5

Gene KPNA4, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-203ENST00000483437 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
KPNA4-203ENST00000483437 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
KPNA4-203ENST00000483437 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
KPNA4-203ENST00000483437 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
KPNA4-203ENST00000483437 FOXD1Q16676 465 aa19.66■□□□□ 0.74
KPNA4-203ENST00000483437 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
KPNA4-203ENST00000483437 PPP6R1Q9UPN7 881 aa18.57■□□□□ 0.56
KPNA4-203ENST00000483437 ADRA2BP18089 450 aa18.46■□□□□ 0.55
KPNA4-203ENST00000483437 PIAS4Q8N2W9 510 aaPredicted RBP18.33■□□□□ 0.52
KPNA4-203ENST00000483437 MSH5O43196 834 aa18.23■□□□□ 0.51
KPNA4-203ENST00000483437 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
KPNA4-203ENST00000483437 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
KPNA4-203ENST00000483437 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
KPNA4-203ENST00000483437 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
KPNA4-203ENST00000483437 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
KPNA4-203ENST00000483437 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
KPNA4-203ENST00000483437 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
KPNA4-203ENST00000483437 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
KPNA4-203ENST00000483437 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
KPNA4-203ENST00000483437 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
KPNA4-203ENST00000483437 KCNA4P22459 653 aa15.91■□□□□ 0.14
KPNA4-203ENST00000483437 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
KPNA4-203ENST00000483437 RNF39Q9H2S5 420 aa15.65■□□□□ 0.1
KPNA4-203ENST00000483437 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
KPNA4-203ENST00000483437 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
KPNA4-203ENST00000483437 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
KPNA4-203ENST00000483437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.05
KPNA4-203ENST00000483437 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
KPNA4-203ENST00000483437 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
KPNA4-203ENST00000483437 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
KPNA4-203ENST00000483437 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
KPNA4-203ENST00000483437 CAPN15O75808 1086 aa14.74□□□□□ -0.05
KPNA4-203ENST00000483437 DSG3P32926 999 aa14.71□□□□□ -0.05
KPNA4-203ENST00000483437 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
KPNA4-203ENST00000483437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.64□□□□□ -0.07
KPNA4-203ENST00000483437 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
KPNA4-203ENST00000483437 ZBTB22O15209 634 aa14.63□□□□□ -0.07
KPNA4-203ENST00000483437 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
KPNA4-203ENST00000483437 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
KPNA4-203ENST00000483437 APLP2Q06481 763 aa14.57□□□□□ -0.08
KPNA4-203ENST00000483437 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
KPNA4-203ENST00000483437 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
KPNA4-203ENST00000483437 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
KPNA4-203ENST00000483437 ABCB7O75027 752 aa14.46□□□□□ -0.09
KPNA4-203ENST00000483437 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.09
KPNA4-203ENST00000483437 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
KPNA4-203ENST00000483437 POLA2Q14181 598 aa14.24□□□□□ -0.13
KPNA4-203ENST00000483437 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
KPNA4-203ENST00000483437 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
KPNA4-203ENST00000483437 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
KPNA4-203ENST00000483437 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
KPNA4-203ENST00000483437 POTEHQ6S545 545 aa13.78□□□□□ -0.2
KPNA4-203ENST00000483437 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
KPNA4-203ENST00000483437 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
KPNA4-203ENST00000483437 FBLN2P98095 1184 aa13.63□□□□□ -0.23
KPNA4-203ENST00000483437 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
KPNA4-203ENST00000483437 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
KPNA4-203ENST00000483437 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
KPNA4-203ENST00000483437 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
KPNA4-203ENST00000483437 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
KPNA4-203ENST00000483437 PITPNM1O00562 1244 aa13.45□□□□□ -0.26
KPNA4-203ENST00000483437 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
KPNA4-203ENST00000483437 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
KPNA4-203ENST00000483437 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
KPNA4-203ENST00000483437 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
KPNA4-203ENST00000483437 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
KPNA4-203ENST00000483437 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
KPNA4-203ENST00000483437 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
KPNA4-203ENST00000483437 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
KPNA4-203ENST00000483437 FKBP8Q14318 412 aa13.08□□□□□ -0.32
KPNA4-203ENST00000483437 PRKAR2AP13861 404 aaKnown RBP13.06□□□□□ -0.32
KPNA4-203ENST00000483437 PRR29P0C7W0 189 aa13□□□□□ -0.33
KPNA4-203ENST00000483437 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
KPNA4-203ENST00000483437 HAX1O00165 279 aa12.98□□□□□ -0.33
KPNA4-203ENST00000483437 EVX2Q03828 476 aa12.98□□□□□ -0.33
KPNA4-203ENST00000483437 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
KPNA4-203ENST00000483437 PROM2Q8N271 834 aa12.95□□□□□ -0.34
KPNA4-203ENST00000483437 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
KPNA4-203ENST00000483437 STAG3Q9UJ98 1225 aa12.83□□□□□ -0.36
KPNA4-203ENST00000483437 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
KPNA4-203ENST00000483437 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
KPNA4-203ENST00000483437 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
KPNA4-203ENST00000483437 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
KPNA4-203ENST00000483437 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
KPNA4-203ENST00000483437 GABBR2O75899 941 aa12.63□□□□□ -0.39
KPNA4-203ENST00000483437 MIER1Q8N108 512 aa12.52□□□□□ -0.41
KPNA4-203ENST00000483437 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
KPNA4-203ENST00000483437 PLCD3Q8N3E9 789 aa12.49□□□□□ -0.41
KPNA4-203ENST00000483437 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
KPNA4-203ENST00000483437 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
KPNA4-203ENST00000483437 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
KPNA4-203ENST00000483437 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
KPNA4-203ENST00000483437 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
KPNA4-203ENST00000483437 CLCN6P51797 869 aa12.41□□□□□ -0.42
KPNA4-203ENST00000483437 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
KPNA4-203ENST00000483437 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
KPNA4-203ENST00000483437 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
KPNA4-203ENST00000483437 PAK3O75914 559 aaPredicted RBP12.34□□□□□ -0.43
KPNA4-203ENST00000483437 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
KPNA4-203ENST00000483437 IFNLR1Q8IU57 520 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms