RNA–Protein interactions for RNA: ENST00000357310.5

APAF1-202, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene APAF1, Length 7,055 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-202ENST00000357310 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
APAF1-202ENST00000357310 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
APAF1-202ENST00000357310 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
APAF1-202ENST00000357310 TTBK1Q5TCY1 1321 aaPredicted RBP21.76■■□□□ 1.07
APAF1-202ENST00000357310 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.03
APAF1-202ENST00000357310 RANGAP1P46060 587 aaPredicted RBP21.41■■□□□ 1.02
APAF1-202ENST00000357310 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
APAF1-202ENST00000357310 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
APAF1-202ENST00000357310 PELP1Q8IZL8 1130 aaKnown RBP21■□□□□ 0.95
APAF1-202ENST00000357310 APLP2Q06481 763 aa20.96■□□□□ 0.95
APAF1-202ENST00000357310 ERICH6Q7L0X2 663 aa20.89■□□□□ 0.94
APAF1-202ENST00000357310 MYT1Q01538 1121 aa20.8■□□□□ 0.92
APAF1-202ENST00000357310 PCGF6Q9BYE7 350 aa20.78■□□□□ 0.92
APAF1-202ENST00000357310 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
APAF1-202ENST00000357310 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
APAF1-202ENST00000357310 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
APAF1-202ENST00000357310 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
APAF1-202ENST00000357310 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
APAF1-202ENST00000357310 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
APAF1-202ENST00000357310 CCER1Q8TC90 406 aaPredicted RBP20.25■□□□□ 0.83
APAF1-202ENST00000357310 SLC4A1APQ9BWU0 796 aaKnown RBP20.16■□□□□ 0.82
APAF1-202ENST00000357310 ITGAEP38570 1179 aa20.08■□□□□ 0.81
APAF1-202ENST00000357310 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
APAF1-202ENST00000357310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
APAF1-202ENST00000357310 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
APAF1-202ENST00000357310 NEFLP07196 543 aa19.99■□□□□ 0.79
APAF1-202ENST00000357310 BCL11AQ9H165 835 aa19.98■□□□□ 0.79
APAF1-202ENST00000357310 CENPBP07199 599 aaPredicted RBP19.95■□□□□ 0.78
APAF1-202ENST00000357310 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
APAF1-202ENST00000357310 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
APAF1-202ENST00000357310 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
APAF1-202ENST00000357310 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
APAF1-202ENST00000357310 CLSPNQ9HAW4 1339 aa19.56■□□□□ 0.72
APAF1-202ENST00000357310 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
APAF1-202ENST00000357310 BCANQ96GW7 911 aa19.32■□□□□ 0.68
APAF1-202ENST00000357310 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
APAF1-202ENST00000357310 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
APAF1-202ENST00000357310 NEUROD1Q13562 356 aa19.15■□□□□ 0.66
APAF1-202ENST00000357310 ARID3CA6NKF2 412 aa19.14■□□□□ 0.65
APAF1-202ENST00000357310 LOC105371045A0A1W2PR82 267 aa19.12■□□□□ 0.65
APAF1-202ENST00000357310 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
APAF1-202ENST00000357310 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
APAF1-202ENST00000357310 PLEKHG5O94827 1062 aa19.11■□□□□ 0.65
APAF1-202ENST00000357310 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
APAF1-202ENST00000357310 FBLN2P98095 1184 aa19.07■□□□□ 0.64
APAF1-202ENST00000357310 SENP3Q9H4L4 574 aaPredicted RBP19.07■□□□□ 0.64
APAF1-202ENST00000357310 RTL5Q5HYW3 569 aaPredicted RBP19.06■□□□□ 0.64
APAF1-202ENST00000357310 A0A0G2JS52 829 aa18.98■□□□□ 0.63
APAF1-202ENST00000357310 ZBTB47Q9UFB7 747 aaPredicted RBP18.95■□□□□ 0.62
APAF1-202ENST00000357310 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
APAF1-202ENST00000357310 HRCP23327 699 aa18.9■□□□□ 0.62
APAF1-202ENST00000357310 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
APAF1-202ENST00000357310 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
APAF1-202ENST00000357310 ARXQ96QS3 562 aa18.78■□□□□ 0.6
APAF1-202ENST00000357310 TRIM26Q12899 539 aaPredicted RBP18.77■□□□□ 0.6
APAF1-202ENST00000357310 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
APAF1-202ENST00000357310 P3H3Q8IVL6 736 aa18.7■□□□□ 0.58
APAF1-202ENST00000357310 ZBTB7CA1YPR0 619 aa18.7■□□□□ 0.58
APAF1-202ENST00000357310 SALL2Q9Y467 1007 aaPredicted RBP18.7■□□□□ 0.58
APAF1-202ENST00000357310 CHGAP10645 457 aaKnown RBP18.68■□□□□ 0.58
APAF1-202ENST00000357310 PABPN1Q86U42 306 aaKnown RBP eCLIP18.66■□□□□ 0.58
APAF1-202ENST00000357310 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
APAF1-202ENST00000357310 ZNF777Q9ULD5 760 aaPredicted RBP18.64■□□□□ 0.57
APAF1-202ENST00000357310 EIF5BO60841 1220 aaKnown RBP18.59■□□□□ 0.57
APAF1-202ENST00000357310 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
APAF1-202ENST00000357310 NEFMP07197 916 aa18.53■□□□□ 0.56
APAF1-202ENST00000357310 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
APAF1-202ENST00000357310 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
APAF1-202ENST00000357310 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
APAF1-202ENST00000357310 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
APAF1-202ENST00000357310 CDK11AQ9UQ88 783 aaPredicted RBP18.48■□□□□ 0.55
APAF1-202ENST00000357310 ESF1Q9H501 851 aaKnown RBP18.48■□□□□ 0.55
APAF1-202ENST00000357310 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.54
APAF1-202ENST00000357310 ANP32CO43423 234 aa18.45■□□□□ 0.54
APAF1-202ENST00000357310 HSP90AA1P07900 732 aaKnown RBP18.45■□□□□ 0.54
APAF1-202ENST00000357310 C14orf37Q86TY3 774 aa18.38■□□□□ 0.53
APAF1-202ENST00000357310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.522e-12■■■■■ 39
APAF1-202ENST00000357310 NBR1Q14596 966 aa18.31■□□□□ 0.52
APAF1-202ENST00000357310 AMER1Q5JTC6 1135 aaPredicted RBP18.26■□□□□ 0.51
APAF1-202ENST00000357310 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
APAF1-202ENST00000357310 ANP32AP39687 249 aaKnown RBP18.2■□□□□ 0.5
APAF1-202ENST00000357310 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
APAF1-202ENST00000357310 CDK11BP21127 795 aaKnown RBP18.15■□□□□ 0.5
APAF1-202ENST00000357310 ANP32BQ92688 251 aaKnown RBP18.15■□□□□ 0.5
APAF1-202ENST00000357310 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
APAF1-202ENST00000357310 HIRIP3Q9BW71 556 aaPredicted RBP18.11■□□□□ 0.49
APAF1-202ENST00000357310 FKBP8Q14318 412 aa18.11■□□□□ 0.49
APAF1-202ENST00000357310 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
APAF1-202ENST00000357310 CHIC2Q9UKJ5 165 aa18.09■□□□□ 0.49
APAF1-202ENST00000357310 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
APAF1-202ENST00000357310 NPHP1O15259 732 aa18.01■□□□□ 0.47
APAF1-202ENST00000357310 HNRNPUQ00839 825 aaKnown RBP eCLIP17.99■□□□□ 0.47
APAF1-202ENST00000357310 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
APAF1-202ENST00000357310 ABCC9O60706 1549 aa17.99■□□□□ 0.47
APAF1-202ENST00000357310 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
APAF1-202ENST00000357310 UPF2Q9HAU5 1272 aaKnown RBP17.94■□□□□ 0.46
APAF1-202ENST00000357310 CLSTN1O94985 981 aa17.93■□□□□ 0.46
APAF1-202ENST00000357310 ANO8Q9HCE9 1232 aaPredicted RBP17.93■□□□□ 0.46
APAF1-202ENST00000357310 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
APAF1-202ENST00000357310 NCLP19338 710 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms