Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.86■■□□□ 1.89
COL20A1Q9P218 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.86■■□□□ 1.89
COL20A1Q9P218 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.86■■□□□ 1.89
COL20A1Q9P218 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.86■■□□□ 1.89
COL20A1Q9P218 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
COL20A1Q9P218 AF131216.4-201ENST00000638924 1588 ntBASIC26.85■■□□□ 1.89
COL20A1Q9P218 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.85■■□□□ 1.89
COL20A1Q9P218 AC091060.1-201ENST00000623524 1766 ntBASIC26.85■■□□□ 1.89
COL20A1Q9P218 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
COL20A1Q9P218 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.85■■□□□ 1.89
COL20A1Q9P218 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.85■■□□□ 1.89
COL20A1Q9P218 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
COL20A1Q9P218 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
COL20A1Q9P218 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.84■■□□□ 1.89
COL20A1Q9P218 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.84■■□□□ 1.89
COL20A1Q9P218 TSPY9P-201ENST00000440215 945 ntBASIC26.84■■□□□ 1.89
COL20A1Q9P218 TSPY11P-201ENST00000442607 1045 ntBASIC26.84■■□□□ 1.89
COL20A1Q9P218 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.84■■□□□ 1.89
COL20A1Q9P218 AC092028.1-203ENST00000608262 953 ntBASIC26.84■■□□□ 1.89
COL20A1Q9P218 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.84■■□□□ 1.89
COL20A1Q9P218 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL20A1Q9P218 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
COL20A1Q9P218 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL20A1Q9P218 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.83■■□□□ 1.89
COL20A1Q9P218 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
COL20A1Q9P218 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.83■■□□□ 1.89
COL20A1Q9P218 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL20A1Q9P218 DUSP8P4-201ENST00000399538 1761 ntBASIC26.83■■□□□ 1.89
COL20A1Q9P218 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
COL20A1Q9P218 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
COL20A1Q9P218 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL20A1Q9P218 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL20A1Q9P218 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.82■■□□□ 1.88
COL20A1Q9P218 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.82■■□□□ 1.88
COL20A1Q9P218 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.82■■□□□ 1.88
COL20A1Q9P218 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL20A1Q9P218 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.82■■□□□ 1.88
COL20A1Q9P218 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL20A1Q9P218 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.81■■□□□ 1.88
COL20A1Q9P218 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.81■■□□□ 1.88
COL20A1Q9P218 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL20A1Q9P218 AC090877.2-201ENST00000558441 1738 ntBASIC26.8■■□□□ 1.88
COL20A1Q9P218 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
COL20A1Q9P218 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL20A1Q9P218 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.8■■□□□ 1.88
COL20A1Q9P218 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL20A1Q9P218 KRT16P3-201ENST00000439127 1283 ntBASIC26.79■■□□□ 1.88
COL20A1Q9P218 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.79■■□□□ 1.88
COL20A1Q9P218 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.79■■□□□ 1.88
COL20A1Q9P218 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL20A1Q9P218 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL20A1Q9P218 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL20A1Q9P218 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
COL20A1Q9P218 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.77■■□□□ 1.88
COL20A1Q9P218 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.77■■□□□ 1.88
COL20A1Q9P218 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.77■■□□□ 1.88
COL20A1Q9P218 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.77■■□□□ 1.88
COL20A1Q9P218 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
COL20A1Q9P218 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.76■■□□□ 1.87
COL20A1Q9P218 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL20A1Q9P218 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.76■■□□□ 1.87
COL20A1Q9P218 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL20A1Q9P218 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL20A1Q9P218 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.75■■□□□ 1.87
COL20A1Q9P218 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL20A1Q9P218 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL20A1Q9P218 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.74■■□□□ 1.87
COL20A1Q9P218 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
COL20A1Q9P218 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
COL20A1Q9P218 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.74■■□□□ 1.87
COL20A1Q9P218 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL20A1Q9P218 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.73■■□□□ 1.87
COL20A1Q9P218 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COL20A1Q9P218 SLC6A10P-202ENST00000431994 2058 ntBASIC26.72■■□□□ 1.87
COL20A1Q9P218 AC145676.1-201ENST00000514988 2004 ntBASIC26.72■■□□□ 1.87
COL20A1Q9P218 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
COL20A1Q9P218 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.72■■□□□ 1.87
COL20A1Q9P218 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL20A1Q9P218 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
COL20A1Q9P218 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.72■■□□□ 1.87
COL20A1Q9P218 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
COL20A1Q9P218 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL20A1Q9P218 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL20A1Q9P218 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL20A1Q9P218 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
COL20A1Q9P218 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COL20A1Q9P218 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
COL20A1Q9P218 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.71■■□□□ 1.87
COL20A1Q9P218 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.71■■□□□ 1.87
COL20A1Q9P218 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC26.71■■□□□ 1.87
COL20A1Q9P218 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
COL20A1Q9P218 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.7■■□□□ 1.87
COL20A1Q9P218 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.7■■□□□ 1.86
COL20A1Q9P218 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL20A1Q9P218 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL20A1Q9P218 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.69■■□□□ 1.86
COL20A1Q9P218 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL20A1Q9P218 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL20A1Q9P218 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL20A1Q9P218 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms