Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNF180Q86T96 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF180Q86T96 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.33■■□□□ 1.81
RNF180Q86T96 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
RNF180Q86T96 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF180Q86T96 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.32■■□□□ 1.8
RNF180Q86T96 AL136162.1-201ENST00000607711 1078 ntBASIC26.32■■□□□ 1.8
RNF180Q86T96 AC092666.2-201ENST00000613287 246 ntBASIC26.32■■□□□ 1.8
RNF180Q86T96 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.32■■□□□ 1.8
RNF180Q86T96 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RNF180Q86T96 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF180Q86T96 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF180Q86T96 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF180Q86T96 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF180Q86T96 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RNF180Q86T96 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.31■■□□□ 1.8
RNF180Q86T96 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF180Q86T96 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
RNF180Q86T96 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF180Q86T96 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF180Q86T96 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RNF180Q86T96 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF180Q86T96 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF180Q86T96 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RNF180Q86T96 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
RNF180Q86T96 SUDS3P1-201ENST00000505831 966 ntBASIC26.29■■□□□ 1.8
RNF180Q86T96 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF180Q86T96 AC135279.3-201ENST00000610945 1311 ntBASIC26.29■■□□□ 1.8
RNF180Q86T96 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RNF180Q86T96 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF180Q86T96 SRD5A1P1-201ENST00000442297 786 ntBASIC26.28■■□□□ 1.8
RNF180Q86T96 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RNF180Q86T96 AL031432.3-201ENST00000607698 485 ntBASIC26.28■■□□□ 1.8
RNF180Q86T96 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF180Q86T96 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF180Q86T96 AC090877.2-201ENST00000558441 1738 ntBASIC26.28■■□□□ 1.8
RNF180Q86T96 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.28■■□□□ 1.8
RNF180Q86T96 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RNF180Q86T96 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.28■■□□□ 1.8
RNF180Q86T96 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.27■■□□□ 1.8
RNF180Q86T96 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.27■■□□□ 1.8
RNF180Q86T96 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF180Q86T96 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RNF180Q86T96 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF180Q86T96 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.26■■□□□ 1.79
RNF180Q86T96 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
RNF180Q86T96 EDA-201ENST00000338901 1233 ntBASIC26.25■■□□□ 1.79
RNF180Q86T96 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.25■■□□□ 1.79
RNF180Q86T96 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RNF180Q86T96 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RNF180Q86T96 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RNF180Q86T96 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 AC026271.2-201ENST00000428091 497 ntBASIC26.24■■□□□ 1.79
RNF180Q86T96 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.24■■□□□ 1.79
RNF180Q86T96 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.24■■□□□ 1.79
RNF180Q86T96 AL355001.2-201ENST00000620617 1191 ntBASIC26.24■■□□□ 1.79
RNF180Q86T96 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF180Q86T96 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF180Q86T96 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
RNF180Q86T96 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.23■■□□□ 1.79
RNF180Q86T96 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.23■■□□□ 1.79
RNF180Q86T96 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.23■■□□□ 1.79
RNF180Q86T96 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.23■■□□□ 1.79
RNF180Q86T96 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.23■■□□□ 1.79
RNF180Q86T96 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.23■■□□□ 1.79
RNF180Q86T96 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF180Q86T96 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RNF180Q86T96 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RNF180Q86T96 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RNF180Q86T96 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RNF180Q86T96 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF180Q86T96 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF180Q86T96 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF180Q86T96 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF180Q86T96 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF180Q86T96 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF180Q86T96 AC024257.2-201ENST00000549699 147 ntBASIC26.21■■□□□ 1.79
RNF180Q86T96 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.21■■□□□ 1.79
RNF180Q86T96 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF180Q86T96 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF180Q86T96 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.2■■□□□ 1.78
RNF180Q86T96 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.2■■□□□ 1.78
RNF180Q86T96 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.2■■□□□ 1.78
RNF180Q86T96 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF180Q86T96 MIR5787-201ENST00000611784 55 ntBASIC26.2■■□□□ 1.78
RNF180Q86T96 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF180Q86T96 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RNF180Q86T96 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RNF180Q86T96 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF180Q86T96 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms