Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CNKSR3Q6P9H4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CNKSR3Q6P9H4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CNKSR3Q6P9H4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CNKSR3Q6P9H4 UNC93B3-201ENST00000308076 687 ntBASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 RARRES2P6-201ENST00000567333 442 ntBASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CNKSR3Q6P9H4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CNKSR3Q6P9H4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CNKSR3Q6P9H4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CNKSR3Q6P9H4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CNKSR3Q6P9H4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CNKSR3Q6P9H4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CNKSR3Q6P9H4 AC090877.2-201ENST00000558441 1738 ntBASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CNKSR3Q6P9H4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 AL136162.1-201ENST00000607711 1078 ntBASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CNKSR3Q6P9H4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 AL031432.3-201ENST00000607698 485 ntBASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNKSR3Q6P9H4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
CNKSR3Q6P9H4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 SUDS3P1-201ENST00000505831 966 ntBASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CNKSR3Q6P9H4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 AC135279.3-201ENST00000610945 1311 ntBASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CNKSR3Q6P9H4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 SRD5A1P1-201ENST00000442297 786 ntBASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CNKSR3Q6P9H4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CNKSR3Q6P9H4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CNKSR3Q6P9H4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CNKSR3Q6P9H4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CNKSR3Q6P9H4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CNKSR3Q6P9H4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 AC092666.2-201ENST00000613287 246 ntBASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CNKSR3Q6P9H4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 EDA-201ENST00000338901 1233 ntBASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 AC026271.2-201ENST00000428091 497 ntBASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CNKSR3Q6P9H4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CNKSR3Q6P9H4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms