Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SMIM23A6NLE4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMIM23A6NLE4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SMIM23A6NLE4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
SMIM23A6NLE4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMIM23A6NLE4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SMIM23A6NLE4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SMIM23A6NLE4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
SMIM23A6NLE4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SMIM23A6NLE4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMIM23A6NLE4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.87■■□□□ 1.41
SMIM23A6NLE4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 AC079834.2-201ENST00000609776 1949 ntBASIC23.86■■□□□ 1.41
SMIM23A6NLE4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMIM23A6NLE4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMIM23A6NLE4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SMIM23A6NLE4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMIM23A6NLE4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMIM23A6NLE4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMIM23A6NLE4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMIM23A6NLE4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.83■■□□□ 1.41
SMIM23A6NLE4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMIM23A6NLE4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.83■■□□□ 1.41
SMIM23A6NLE4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.83■■□□□ 1.41
SMIM23A6NLE4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SMIM23A6NLE4 DUX4L11-201ENST00000611504 1267 ntBASIC23.83■■□□□ 1.41
SMIM23A6NLE4 DUX4L12-201ENST00000614593 1267 ntBASIC23.83■■□□□ 1.41
SMIM23A6NLE4 DUX4L14-201ENST00000621227 1267 ntBASIC23.83■■□□□ 1.41
SMIM23A6NLE4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
SMIM23A6NLE4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMIM23A6NLE4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMIM23A6NLE4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMIM23A6NLE4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMIM23A6NLE4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM23A6NLE4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.8■■□□□ 1.4
SMIM23A6NLE4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMIM23A6NLE4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.8■■□□□ 1.4
SMIM23A6NLE4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
SMIM23A6NLE4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SMIM23A6NLE4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMIM23A6NLE4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.77■■□□□ 1.4
SMIM23A6NLE4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.77■■□□□ 1.4
SMIM23A6NLE4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms