Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MACF1Q9UPN3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC12.87□□□□□ -0.35
MACF1Q9UPN3 AL031258.1-201ENST00000623562 325 ntBASIC12.87□□□□□ -0.35
MACF1Q9UPN3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC12.87□□□□□ -0.35
MACF1Q9UPN3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC12.85□□□□□ -0.35
MACF1Q9UPN3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC12.81□□□□□ -0.36
MACF1Q9UPN3 AL162393.1-201ENST00000437852 946 ntBASIC12.8□□□□□ -0.36
MACF1Q9UPN3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC12.79□□□□□ -0.36
MACF1Q9UPN3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MACF1Q9UPN3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC12.78□□□□□ -0.36
MACF1Q9UPN3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MACF1Q9UPN3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
MACF1Q9UPN3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC12.76□□□□□ -0.37
MACF1Q9UPN3 ABHD17AP4-201ENST00000411545 909 ntBASIC12.76□□□□□ -0.37
MACF1Q9UPN3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
MACF1Q9UPN3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MACF1Q9UPN3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MACF1Q9UPN3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC12.72□□□□□ -0.37
MACF1Q9UPN3 SETD8P1-201ENST00000623146 1180 ntBASIC12.72□□□□□ -0.37
MACF1Q9UPN3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.72□□□□□ -0.37
MACF1Q9UPN3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MACF1Q9UPN3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MACF1Q9UPN3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC12.71□□□□□ -0.38
MACF1Q9UPN3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC12.7□□□□□ -0.38
MACF1Q9UPN3 AP006261.1-201ENST00000584783 668 ntBASIC12.7□□□□□ -0.38
MACF1Q9UPN3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MACF1Q9UPN3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
MACF1Q9UPN3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MACF1Q9UPN3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC12.68□□□□□ -0.38
MACF1Q9UPN3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MACF1Q9UPN3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC12.67□□□□□ -0.38
MACF1Q9UPN3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MACF1Q9UPN3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MACF1Q9UPN3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC12.61□□□□□ -0.39
MACF1Q9UPN3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC12.6□□□□□ -0.39
MACF1Q9UPN3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC12.6□□□□□ -0.39
MACF1Q9UPN3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MACF1Q9UPN3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MACF1Q9UPN3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MACF1Q9UPN3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC12.56□□□□□ -0.4
MACF1Q9UPN3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MACF1Q9UPN3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
MACF1Q9UPN3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC12.54□□□□□ -0.4
MACF1Q9UPN3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MACF1Q9UPN3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC12.52□□□□□ -0.41
MACF1Q9UPN3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MACF1Q9UPN3 HSD17B1P1-201ENST00000590052 955 ntBASIC12.51□□□□□ -0.41
MACF1Q9UPN3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
MACF1Q9UPN3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC12.49□□□□□ -0.41
MACF1Q9UPN3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC12.48□□□□□ -0.41
MACF1Q9UPN3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
MACF1Q9UPN3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
MACF1Q9UPN3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC12.46□□□□□ -0.42
MACF1Q9UPN3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC12.45□□□□□ -0.42
MACF1Q9UPN3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC12.45□□□□□ -0.42
MACF1Q9UPN3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
MACF1Q9UPN3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC12.45□□□□□ -0.42
MACF1Q9UPN3 MIR4449-201ENST00000578365 66 ntBASIC12.45□□□□□ -0.42
MACF1Q9UPN3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
MACF1Q9UPN3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MACF1Q9UPN3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
MACF1Q9UPN3 MIR3665-201ENST00000578708 105 ntBASIC12.43□□□□□ -0.42
MACF1Q9UPN3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.43□□□□□ -0.42
MACF1Q9UPN3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
MACF1Q9UPN3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
MACF1Q9UPN3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC12.42□□□□□ -0.42
MACF1Q9UPN3 HNRNPLP2-201ENST00000568980 1570 ntBASIC12.41□□□□□ -0.42
MACF1Q9UPN3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MACF1Q9UPN3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC12.41□□□□□ -0.42
MACF1Q9UPN3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC12.41□□□□□ -0.42
MACF1Q9UPN3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
MACF1Q9UPN3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
MACF1Q9UPN3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
MACF1Q9UPN3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MACF1Q9UPN3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC12.38□□□□□ -0.43
MACF1Q9UPN3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
MACF1Q9UPN3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC12.37□□□□□ -0.43
MACF1Q9UPN3 CAHM-201ENST00000604200 896 ntBASIC12.35□□□□□ -0.43
MACF1Q9UPN3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
MACF1Q9UPN3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.35□□□□□ -0.43
MACF1Q9UPN3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
MACF1Q9UPN3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MACF1Q9UPN3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.33□□□□□ -0.44
MACF1Q9UPN3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC12.33□□□□□ -0.44
MACF1Q9UPN3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC12.33□□□□□ -0.44
MACF1Q9UPN3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MACF1Q9UPN3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC12.32□□□□□ -0.44
MACF1Q9UPN3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MACF1Q9UPN3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC12.31□□□□□ -0.44
MACF1Q9UPN3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MACF1Q9UPN3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC12.31□□□□□ -0.44
MACF1Q9UPN3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC12.3□□□□□ -0.44
MACF1Q9UPN3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms