Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
O00370 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.07■□□□□ 0.32
O00370 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
O00370 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.07■□□□□ 0.32
O00370 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.07■□□□□ 0.32
O00370 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.07■□□□□ 0.32
O00370 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.07■□□□□ 0.32
O00370 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
O00370 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.07■□□□□ 0.32
O00370 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.07■□□□□ 0.32
O00370 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.07■□□□□ 0.32
O00370 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.07■□□□□ 0.32
O00370 RN7SL828P-201ENST00000607615 303 ntBASIC17.07■□□□□ 0.32
O00370 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.07■□□□□ 0.32
O00370 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 AP005117.1-202ENST00000581724 1908 ntBASIC17.07■□□□□ 0.32
O00370 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.07■□□□□ 0.32
O00370 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
O00370 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.07■□□□□ 0.32
O00370 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
O00370 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
O00370 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.07■□□□□ 0.32
O00370 BNIP3P1-202ENST00000550043 1585 ntBASIC17.06■□□□□ 0.32
O00370 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
O00370 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 TUBB3P1-201ENST00000405796 1332 ntBASIC17.06■□□□□ 0.32
O00370 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.06■□□□□ 0.32
O00370 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
O00370 AC004987.2-201ENST00000395959 1148 ntBASIC17.06■□□□□ 0.32
O00370 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.06■□□□□ 0.32
O00370 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.06■□□□□ 0.32
O00370 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.06■□□□□ 0.32
O00370 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.06■□□□□ 0.32
O00370 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.06■□□□□ 0.32
O00370 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
O00370 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 TSPY26P-202ENST00000565928 3884 ntBASIC17.06■□□□□ 0.32
O00370 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
O00370 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
O00370 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.06■□□□□ 0.32
O00370 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.06■□□□□ 0.32
O00370 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
O00370 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
O00370 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
O00370 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
O00370 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
O00370 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
O00370 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
O00370 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
O00370 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.05■□□□□ 0.32
O00370 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.05■□□□□ 0.32
O00370 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.05■□□□□ 0.32
O00370 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.05■□□□□ 0.32
O00370 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.05■□□□□ 0.32
O00370 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.05■□□□□ 0.32
O00370 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.05■□□□□ 0.32
O00370 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
O00370 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.05■□□□□ 0.32
O00370 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
O00370 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.05■□□□□ 0.32
O00370 AC011477.6-201ENST00000604980 1927 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms