RNA–Protein interactions for RNA: ENST00000391764.7

NDUFA3-204, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3 BASIC

Gene NDUFA3, Length 267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-204ENST00000391764 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
NDUFA3-204ENST00000391764 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
NDUFA3-204ENST00000391764 ABCC9O60706 1549 aa34.02■■■■□ 3.04
NDUFA3-204ENST00000391764 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
NDUFA3-204ENST00000391764 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
NDUFA3-204ENST00000391764 NACADO15069 1562 aa32.71■■■□□ 2.83
NDUFA3-204ENST00000391764 DCAF8L2P0C7V8 631 aa32.66■■■□□ 2.82
NDUFA3-204ENST00000391764 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
NDUFA3-204ENST00000391764 DCAF1Q9Y4B6 1507 aa32.42■■■□□ 2.78
NDUFA3-204ENST00000391764 UNC13AQ9UPW8 1703 aa32.18■■■□□ 2.74
NDUFA3-204ENST00000391764 SCRIBQ14160 1630 aa31.9■■■□□ 2.7
NDUFA3-204ENST00000391764 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
NDUFA3-204ENST00000391764 PABPN1Q86U42 306 aaKnown RBP eCLIP31.74■■■□□ 2.67
NDUFA3-204ENST00000391764 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
NDUFA3-204ENST00000391764 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
NDUFA3-204ENST00000391764 EIF4G1Q04637 1599 aaKnown RBP30.94■■■□□ 2.54
NDUFA3-204ENST00000391764 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
NDUFA3-204ENST00000391764 CECR2Q9BXF3 1484 aa30.57■■■□□ 2.48
NDUFA3-204ENST00000391764 SMARCA4P51532 1647 aa30.48■■■□□ 2.47
NDUFA3-204ENST00000391764 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
NDUFA3-204ENST00000391764 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
NDUFA3-204ENST00000391764 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
NDUFA3-204ENST00000391764 SMARCA2P51531 1590 aa30.2■■■□□ 2.42
NDUFA3-204ENST00000391764 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
NDUFA3-204ENST00000391764 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
NDUFA3-204ENST00000391764 HMGXB3Q12766 1538 aa30.07■■■□□ 2.4
NDUFA3-204ENST00000391764 WIZO95785 1651 aa30.01■■■□□ 2.4
NDUFA3-204ENST00000391764 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
NDUFA3-204ENST00000391764 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
NDUFA3-204ENST00000391764 TOP2AP11388 1531 aaKnown RBP29.65■■■□□ 2.34
NDUFA3-204ENST00000391764 NESP48681 1621 aa29.49■■■□□ 2.31
NDUFA3-204ENST00000391764 LAMC3Q9Y6N6 1575 aa29.41■■■□□ 2.3
NDUFA3-204ENST00000391764 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
NDUFA3-204ENST00000391764 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.27
NDUFA3-204ENST00000391764 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
NDUFA3-204ENST00000391764 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
NDUFA3-204ENST00000391764 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
NDUFA3-204ENST00000391764 CFTRP13569 1480 aa29.13■■■□□ 2.25
NDUFA3-204ENST00000391764 PDS5BQ9NTI5 1447 aa29.12■■■□□ 2.25
NDUFA3-204ENST00000391764 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
NDUFA3-204ENST00000391764 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
NDUFA3-204ENST00000391764 FANCD2Q9BXW9 1451 aa28.98■■■□□ 2.23
NDUFA3-204ENST00000391764 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
NDUFA3-204ENST00000391764 CUX2O14529 1486 aa28.92■■■□□ 2.22
NDUFA3-204ENST00000391764 MRC2Q9UBG0 1479 aa28.89■■■□□ 2.22
NDUFA3-204ENST00000391764 WDR62O43379 1518 aa28.81■■■□□ 2.2
NDUFA3-204ENST00000391764 URB2Q14146 1524 aaKnown RBP28.73■■■□□ 2.19
NDUFA3-204ENST00000391764 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
NDUFA3-204ENST00000391764 TOPBP1Q92547 1522 aa28.55■■■□□ 2.16
NDUFA3-204ENST00000391764 ABCC8Q09428 1581 aa28.47■■■□□ 2.15
NDUFA3-204ENST00000391764 CUX1P39880 1505 aa28.4■■■□□ 2.14
NDUFA3-204ENST00000391764 POLA1P09884 1462 aaPredicted RBP28.31■■■□□ 2.12
NDUFA3-204ENST00000391764 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
NDUFA3-204ENST00000391764 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
NDUFA3-204ENST00000391764 TARBP1Q13395 1621 aaKnown RBP28.27■■■□□ 2.12
NDUFA3-204ENST00000391764 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
NDUFA3-204ENST00000391764 BIVM-ERCC5R4GMW8 1640 aa28.22■■■□□ 2.11
NDUFA3-204ENST00000391764 SYNJ1O43426 1573 aa28.22■■■□□ 2.11
NDUFA3-204ENST00000391764 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.1
NDUFA3-204ENST00000391764 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.11e-6■■■■■ 58.5
NDUFA3-204ENST00000391764 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
NDUFA3-204ENST00000391764 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
NDUFA3-204ENST00000391764 SOGA1O94964 1423 aa28.14■■■□□ 2.1
NDUFA3-204ENST00000391764 WDR97A6NE52 1622 aa28.14■■■□□ 2.09
NDUFA3-204ENST00000391764 AQRO60306 1485 aaKnown RBP eCLIP28.03■■■□□ 2.08
NDUFA3-204ENST00000391764 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
NDUFA3-204ENST00000391764 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
NDUFA3-204ENST00000391764 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
NDUFA3-204ENST00000391764 ABCA5Q8WWZ7 1642 aa27.93■■■□□ 2.06
NDUFA3-204ENST00000391764 CHD1O14646 1710 aa27.86■■■□□ 2.05
NDUFA3-204ENST00000391764 GAPVD1Q14C86 1478 aa27.85■■■□□ 2.05
NDUFA3-204ENST00000391764 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
NDUFA3-204ENST00000391764 DNAJC5Q9H3Z4 198 aa27.83■■■□□ 2.05
NDUFA3-204ENST00000391764 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
NDUFA3-204ENST00000391764 MAGI1Q96QZ7 1491 aaPredicted RBP27.75■■■□□ 2.03
NDUFA3-204ENST00000391764 ADAMTS12P58397 1594 aa27.67■■■□□ 2.02
NDUFA3-204ENST00000391764 FBLN2P98095 1184 aa27.65■■■□□ 2.02
NDUFA3-204ENST00000391764 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
NDUFA3-204ENST00000391764 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
NDUFA3-204ENST00000391764 SYNJ2O15056 1496 aa27.64■■■□□ 2.01
NDUFA3-204ENST00000391764 KIF27Q86VH2 1401 aa27.57■■■□□ 2
NDUFA3-204ENST00000391764 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
NDUFA3-204ENST00000391764 TRIM41Q8WV44 630 aa27.52■■■□□ 2
NDUFA3-204ENST00000391764 FHAD1B1AJZ9 1412 aa27.51■■□□□ 1.99
NDUFA3-204ENST00000391764 GRIN2AQ12879 1464 aa27.5■■□□□ 1.99
NDUFA3-204ENST00000391764 CUL7Q14999 1698 aa27.48■■□□□ 1.99
NDUFA3-204ENST00000391764 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
NDUFA3-204ENST00000391764 RUSC2Q8N2Y8 1516 aa27.43■■□□□ 1.98
NDUFA3-204ENST00000391764 CEP170Q5SW79 1584 aa27.42■■□□□ 1.98
NDUFA3-204ENST00000391764 IGF1RP08069 1367 aa27.41■■□□□ 1.98
NDUFA3-204ENST00000391764 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
NDUFA3-204ENST00000391764 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
NDUFA3-204ENST00000391764 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
NDUFA3-204ENST00000391764 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
NDUFA3-204ENST00000391764 NUP160Q12769 1436 aa27.34■■□□□ 1.97
NDUFA3-204ENST00000391764 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
NDUFA3-204ENST00000391764 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
NDUFA3-204ENST00000391764 SHROOM2Q13796 1616 aa27.2■■□□□ 1.95
NDUFA3-204ENST00000391764 RAPGEF2Q9Y4G8 1499 aa27.16■■□□□ 1.94
NDUFA3-204ENST00000391764 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms