RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
CACFD1-206ENST00000540581 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
CACFD1-206ENST00000540581 SUPT5HO00267 1087 aaKnown RBP27.66■■■□□ 2.02
CACFD1-206ENST00000540581 DCAF8L2P0C7V8 631 aa27.17■■□□□ 1.94
CACFD1-206ENST00000540581 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
CACFD1-206ENST00000540581 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
CACFD1-206ENST00000540581 MYO15BQ96JP2 1530 aa26.66■■□□□ 1.86
CACFD1-206ENST00000540581 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
CACFD1-206ENST00000540581 PCGF6Q9BYE7 350 aa26.46■■□□□ 1.83
CACFD1-206ENST00000540581 HRCP23327 699 aa26.36■■□□□ 1.81
CACFD1-206ENST00000540581 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
CACFD1-206ENST00000540581 PPARGC1BQ86YN6 1023 aaKnown RBP26.17■■□□□ 1.78
CACFD1-206ENST00000540581 EHMT2Q96KQ7 1210 aa25.76■■□□□ 1.71
CACFD1-206ENST00000540581 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
CACFD1-206ENST00000540581 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
CACFD1-206ENST00000540581 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
CACFD1-206ENST00000540581 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
CACFD1-206ENST00000540581 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
CACFD1-206ENST00000540581 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
CACFD1-206ENST00000540581 ABCC9O60706 1549 aa25.34■■□□□ 1.65
CACFD1-206ENST00000540581 RB1CC1Q8TDY2 1594 aa25.19■■□□□ 1.62
CACFD1-206ENST00000540581 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
CACFD1-206ENST00000540581 ZEB1P37275 1124 aaPredicted RBP24.97■■□□□ 1.59
CACFD1-206ENST00000540581 TTBK1Q5TCY1 1321 aaPredicted RBP24.93■■□□□ 1.58
CACFD1-206ENST00000540581 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
CACFD1-206ENST00000540581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.81■■□□□ 1.56
CACFD1-206ENST00000540581 WIZO95785 1651 aa24.73■■□□□ 1.55
CACFD1-206ENST00000540581 CCER1Q8TC90 406 aaPredicted RBP24.68■■□□□ 1.54
CACFD1-206ENST00000540581 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
CACFD1-206ENST00000540581 NACADO15069 1562 aa24.57■■□□□ 1.52
CACFD1-206ENST00000540581 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
CACFD1-206ENST00000540581 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
CACFD1-206ENST00000540581 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
CACFD1-206ENST00000540581 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
CACFD1-206ENST00000540581 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
CACFD1-206ENST00000540581 SOGA1O94964 1423 aa24.3■■□□□ 1.48
CACFD1-206ENST00000540581 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
CACFD1-206ENST00000540581 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CACFD1-206ENST00000540581 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
CACFD1-206ENST00000540581 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
CACFD1-206ENST00000540581 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.46
CACFD1-206ENST00000540581 RUSC2Q8N2Y8 1516 aa24.2■■□□□ 1.46
CACFD1-206ENST00000540581 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
CACFD1-206ENST00000540581 CSRNP3Q8WYN3 585 aa24.17■■□□□ 1.46
CACFD1-206ENST00000540581 TOP2AP11388 1531 aaKnown RBP24.13■■□□□ 1.45
CACFD1-206ENST00000540581 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
CACFD1-206ENST00000540581 GTF3C3Q9Y5Q9 886 aa24.09■■□□□ 1.45
CACFD1-206ENST00000540581 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
CACFD1-206ENST00000540581 SMARCA4P51532 1647 aa24.08■■□□□ 1.44
CACFD1-206ENST00000540581 YTHDC1Q96MU7 727 aaKnown RBP24.07■■□□□ 1.44
CACFD1-206ENST00000540581 PELP1Q8IZL8 1130 aaKnown RBP24.07■■□□□ 1.44
CACFD1-206ENST00000540581 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
CACFD1-206ENST00000540581 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
CACFD1-206ENST00000540581 CENPBP07199 599 aaPredicted RBP23.99■■□□□ 1.43
CACFD1-206ENST00000540581 UNC13AQ9UPW8 1703 aa23.91■■□□□ 1.42
CACFD1-206ENST00000540581 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
CACFD1-206ENST00000540581 GOLGA3Q08378 1498 aa23.86■■□□□ 1.41
CACFD1-206ENST00000540581 APLP2Q06481 763 aa23.81■■□□□ 1.4
CACFD1-206ENST00000540581 EEA1Q15075 1411 aa23.8■■□□□ 1.4
CACFD1-206ENST00000540581 MIER1Q8N108 512 aa23.77■■□□□ 1.4
CACFD1-206ENST00000540581 CLIP1P30622 1438 aa23.73■■□□□ 1.39
CACFD1-206ENST00000540581 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
CACFD1-206ENST00000540581 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
CACFD1-206ENST00000540581 CEP164Q9UPV0 1460 aa23.65■■□□□ 1.38
CACFD1-206ENST00000540581 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
CACFD1-206ENST00000540581 VPS8Q8N3P4 1428 aa23.55■■□□□ 1.36
CACFD1-206ENST00000540581 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
CACFD1-206ENST00000540581 ITGAEP38570 1179 aa23.49■■□□□ 1.35
CACFD1-206ENST00000540581 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
CACFD1-206ENST00000540581 KIF21BO75037 1637 aa23.45■■□□□ 1.34
CACFD1-206ENST00000540581 KANK4Q5T7N3 995 aaPredicted RBP23.45■■□□□ 1.34
CACFD1-206ENST00000540581 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
CACFD1-206ENST00000540581 DHX57Q6P158 1386 aaKnown RBP23.27■■□□□ 1.32
CACFD1-206ENST00000540581 ARAP1Q96P48 1450 aa23.2■■□□□ 1.31
CACFD1-206ENST00000540581 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
CACFD1-206ENST00000540581 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
CACFD1-206ENST00000540581 PRXQ9BXM0 1461 aa23.12■■□□□ 1.29
CACFD1-206ENST00000540581 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
CACFD1-206ENST00000540581 KCNH8Q96L42 1107 aa23.08■■□□□ 1.29
CACFD1-206ENST00000540581 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
CACFD1-206ENST00000540581 CUX1P39880 1505 aa23.06■■□□□ 1.28
CACFD1-206ENST00000540581 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
CACFD1-206ENST00000540581 FAM50AQ14320 339 aaKnown RBP23.02■■□□□ 1.28
CACFD1-206ENST00000540581 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
CACFD1-206ENST00000540581 SUPT16HQ9Y5B9 1047 aaKnown RBP23.01■■□□□ 1.27
CACFD1-206ENST00000540581 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
CACFD1-206ENST00000540581 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
CACFD1-206ENST00000540581 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
CACFD1-206ENST00000540581 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
CACFD1-206ENST00000540581 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
CACFD1-206ENST00000540581 RRBP1Q9P2E9 1410 aaKnown RBP22.95■■□□□ 1.26
CACFD1-206ENST00000540581 BCANQ96GW7 911 aa22.95■■□□□ 1.26
CACFD1-206ENST00000540581 RAB3GAP2Q9H2M9 1393 aa22.94■■□□□ 1.26
CACFD1-206ENST00000540581 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
CACFD1-206ENST00000540581 CUX2O14529 1486 aa22.9■■□□□ 1.26
CACFD1-206ENST00000540581 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
CACFD1-206ENST00000540581 IGF1RP08069 1367 aa22.83■■□□□ 1.25
CACFD1-206ENST00000540581 CFTRP13569 1480 aa22.8■■□□□ 1.24
CACFD1-206ENST00000540581 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
CACFD1-206ENST00000540581 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms