RNA–Protein interactions for RNA: ENST00000314124.11

TMEM40-202, Transcript of transmembrane protein 40, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TMEM40, Length 2,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-202ENST00000314124 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
TMEM40-202ENST00000314124 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
TMEM40-202ENST00000314124 SUPT5HO00267 1087 aaKnown RBP26.55■■□□□ 1.84
TMEM40-202ENST00000314124 HRCP23327 699 aa26.43■■□□□ 1.82
TMEM40-202ENST00000314124 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
TMEM40-202ENST00000314124 CCDC180Q9P1Z9 1646 aa26.2■■□□□ 1.79
TMEM40-202ENST00000314124 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
TMEM40-202ENST00000314124 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
TMEM40-202ENST00000314124 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
TMEM40-202ENST00000314124 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
TMEM40-202ENST00000314124 PPARGC1BQ86YN6 1023 aaKnown RBP25.63■■□□□ 1.69
TMEM40-202ENST00000314124 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
TMEM40-202ENST00000314124 TRIM26Q12899 539 aaPredicted RBP25.4■■□□□ 1.66
TMEM40-202ENST00000314124 LOC105371045A0A1W2PR82 267 aa25.33■■□□□ 1.65
TMEM40-202ENST00000314124 ZEB1P37275 1124 aaPredicted RBP25.21■■□□□ 1.63
TMEM40-202ENST00000314124 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
TMEM40-202ENST00000314124 ABCC9O60706 1549 aa25.03■■□□□ 1.6
TMEM40-202ENST00000314124 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
TMEM40-202ENST00000314124 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
TMEM40-202ENST00000314124 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
TMEM40-202ENST00000314124 RB1CC1Q8TDY2 1594 aa24.66■■□□□ 1.54
TMEM40-202ENST00000314124 SCRIBQ14160 1630 aa24.54■■□□□ 1.52
TMEM40-202ENST00000314124 FAM9AQ8IZU1 332 aaPredicted RBP24.47■■□□□ 1.51
TMEM40-202ENST00000314124 ACIN1Q9UKV3 1341 aaKnown RBP24.31■■□□□ 1.48
TMEM40-202ENST00000314124 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
TMEM40-202ENST00000314124 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
TMEM40-202ENST00000314124 MYT1Q01538 1121 aa24.17■■□□□ 1.46
TMEM40-202ENST00000314124 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
TMEM40-202ENST00000314124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
TMEM40-202ENST00000314124 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
TMEM40-202ENST00000314124 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
TMEM40-202ENST00000314124 DIEXFQ68CQ4 756 aaKnown RBP24.09■■□□□ 1.45
TMEM40-202ENST00000314124 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.44
TMEM40-202ENST00000314124 WIZO95785 1651 aa24.05■■□□□ 1.44
TMEM40-202ENST00000314124 NACADO15069 1562 aa24.05■■□□□ 1.44
TMEM40-202ENST00000314124 GTF3C3Q9Y5Q9 886 aa24.01■■□□□ 1.43
TMEM40-202ENST00000314124 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
TMEM40-202ENST00000314124 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
TMEM40-202ENST00000314124 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
TMEM40-202ENST00000314124 CEP162Q5TB80 1403 aa23.8■■□□□ 1.4
TMEM40-202ENST00000314124 ZNF316A6NFI3 1004 aaPredicted RBP23.77■■□□□ 1.4
TMEM40-202ENST00000314124 TNIKQ9UKE5 1360 aa23.75■■□□□ 1.39
TMEM40-202ENST00000314124 TOP2AP11388 1531 aaKnown RBP23.71■■□□□ 1.39
TMEM40-202ENST00000314124 EEA1Q15075 1411 aa23.7■■□□□ 1.39
TMEM40-202ENST00000314124 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
TMEM40-202ENST00000314124 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
TMEM40-202ENST00000314124 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
TMEM40-202ENST00000314124 SMARCA2P51531 1590 aa23.58■■□□□ 1.36
TMEM40-202ENST00000314124 SOGA1O94964 1423 aa23.56■■□□□ 1.36
TMEM40-202ENST00000314124 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
TMEM40-202ENST00000314124 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
TMEM40-202ENST00000314124 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
TMEM40-202ENST00000314124 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
TMEM40-202ENST00000314124 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
TMEM40-202ENST00000314124 MIER1Q8N108 512 aa23.43■■□□□ 1.34
TMEM40-202ENST00000314124 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
TMEM40-202ENST00000314124 KIF21BO75037 1637 aa23.34■■□□□ 1.33
TMEM40-202ENST00000314124 CEP164Q9UPV0 1460 aa23.33■■□□□ 1.33
TMEM40-202ENST00000314124 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
TMEM40-202ENST00000314124 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
TMEM40-202ENST00000314124 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
TMEM40-202ENST00000314124 CLIP1P30622 1438 aa23.24■■□□□ 1.31
TMEM40-202ENST00000314124 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
TMEM40-202ENST00000314124 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
TMEM40-202ENST00000314124 APLP2Q06481 763 aa23.18■■□□□ 1.3
TMEM40-202ENST00000314124 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
TMEM40-202ENST00000314124 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.28
TMEM40-202ENST00000314124 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
TMEM40-202ENST00000314124 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
TMEM40-202ENST00000314124 DHX57Q6P158 1386 aaKnown RBP22.98■■□□□ 1.27
TMEM40-202ENST00000314124 ERICH3Q5RHP9 1530 aa22.86■■□□□ 1.25
TMEM40-202ENST00000314124 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
TMEM40-202ENST00000314124 RRBP1Q9P2E9 1410 aaKnown RBP22.8■■□□□ 1.24
TMEM40-202ENST00000314124 CUX2O14529 1486 aa22.8■■□□□ 1.24
TMEM40-202ENST00000314124 BICRAQ9NZM4 1560 aa22.8■■□□□ 1.24
TMEM40-202ENST00000314124 TSHZ2Q9NRE2 1034 aa22.77■■□□□ 1.24
TMEM40-202ENST00000314124 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
TMEM40-202ENST00000314124 BIVM-ERCC5R4GMW8 1640 aa22.77■■□□□ 1.23
TMEM40-202ENST00000314124 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
TMEM40-202ENST00000314124 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
TMEM40-202ENST00000314124 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
TMEM40-202ENST00000314124 ANP32EQ9BTT0 268 aa22.72■■□□□ 1.23
TMEM40-202ENST00000314124 KANK4Q5T7N3 995 aaPredicted RBP22.66■■□□□ 1.22
TMEM40-202ENST00000314124 CCNB3Q8WWL7 1395 aa22.64■■□□□ 1.22
TMEM40-202ENST00000314124 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
TMEM40-202ENST00000314124 MAPKBP1O60336 1514 aa22.52■■□□□ 1.2
TMEM40-202ENST00000314124 KIF27Q86VH2 1401 aa22.51■■□□□ 1.19
TMEM40-202ENST00000314124 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
TMEM40-202ENST00000314124 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
TMEM40-202ENST00000314124 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
TMEM40-202ENST00000314124 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
TMEM40-202ENST00000314124 FKBP8Q14318 412 aa22.44■■□□□ 1.18
TMEM40-202ENST00000314124 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
TMEM40-202ENST00000314124 NEFLP07196 543 aa22.42■■□□□ 1.18
TMEM40-202ENST00000314124 CUX1P39880 1505 aa22.42■■□□□ 1.18
TMEM40-202ENST00000314124 ITGAEP38570 1179 aa22.41■■□□□ 1.18
TMEM40-202ENST00000314124 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
TMEM40-202ENST00000314124 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
TMEM40-202ENST00000314124 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
TMEM40-202ENST00000314124 BCANQ96GW7 911 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms