RNA–Protein interactions for RNA: ENST00000560714.1

AC108449.3-201, humanhuman

TSL 3 BASIC

Gene AC108449.3, Length 585 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108449.3-201ENST00000560714 NISCHQ9Y2I1 1504 aa40.92■■■■■ 4.14
AC108449.3-201ENST00000560714 CCDC180Q9P1Z9 1646 aa36.71■■■■□ 3.47
AC108449.3-201ENST00000560714 ABCC9O60706 1549 aa36.69■■■■□ 3.46
AC108449.3-201ENST00000560714 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
AC108449.3-201ENST00000560714 NACADO15069 1562 aa34.72■■■■□ 3.15
AC108449.3-201ENST00000560714 DCAF8L2P0C7V8 631 aa34.55■■■■□ 3.12
AC108449.3-201ENST00000560714 DNAJC5BQ9UF47 199 aa34.32■■■■□ 3.08
AC108449.3-201ENST00000560714 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
AC108449.3-201ENST00000560714 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
AC108449.3-201ENST00000560714 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
AC108449.3-201ENST00000560714 ZCCHC6Q5VYS8 1495 aaKnown RBP33.93■■■■□ 3.02
AC108449.3-201ENST00000560714 BICRAQ9NZM4 1560 aa33.87■■■■□ 3.01
AC108449.3-201ENST00000560714 DCAF1Q9Y4B6 1507 aa33.81■■■■□ 3
AC108449.3-201ENST00000560714 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
AC108449.3-201ENST00000560714 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
AC108449.3-201ENST00000560714 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
AC108449.3-201ENST00000560714 EIF4G1Q04637 1599 aaKnown RBP33.08■■■□□ 2.89
AC108449.3-201ENST00000560714 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
AC108449.3-201ENST00000560714 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
AC108449.3-201ENST00000560714 ATAD2BQ9ULI0 1458 aa31.94■■■□□ 2.7
AC108449.3-201ENST00000560714 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
AC108449.3-201ENST00000560714 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
AC108449.3-201ENST00000560714 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
AC108449.3-201ENST00000560714 BAZ1AQ9NRL2 1556 aaPredicted RBP31.78■■■□□ 2.68
AC108449.3-201ENST00000560714 ERCC6Q03468 1493 aa31.72■■■□□ 2.67
AC108449.3-201ENST00000560714 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
AC108449.3-201ENST00000560714 CUX2O14529 1486 aa31.64■■■□□ 2.66
AC108449.3-201ENST00000560714 PEG3Q9GZU2 1588 aa31.6■■■□□ 2.65
AC108449.3-201ENST00000560714 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
AC108449.3-201ENST00000560714 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
AC108449.3-201ENST00000560714 NESP48681 1621 aa31.49■■■□□ 2.63
AC108449.3-201ENST00000560714 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
AC108449.3-201ENST00000560714 THOC2Q8NI27 1593 aaKnown RBP31.18■■■□□ 2.58
AC108449.3-201ENST00000560714 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
AC108449.3-201ENST00000560714 WIZO95785 1651 aa31.13■■■□□ 2.57
AC108449.3-201ENST00000560714 KIF21AQ7Z4S6 1674 aa31.09■■■□□ 2.57
AC108449.3-201ENST00000560714 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
AC108449.3-201ENST00000560714 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
AC108449.3-201ENST00000560714 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
AC108449.3-201ENST00000560714 WDR62O43379 1518 aa30.79■■■□□ 2.52
AC108449.3-201ENST00000560714 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
AC108449.3-201ENST00000560714 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
AC108449.3-201ENST00000560714 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
AC108449.3-201ENST00000560714 CFTRP13569 1480 aa30.72■■■□□ 2.51
AC108449.3-201ENST00000560714 URB2Q14146 1524 aaKnown RBP30.44■■■□□ 2.46
AC108449.3-201ENST00000560714 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
AC108449.3-201ENST00000560714 PRDM2Q13029 1718 aa30.4■■■□□ 2.46
AC108449.3-201ENST00000560714 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
AC108449.3-201ENST00000560714 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
AC108449.3-201ENST00000560714 IFT140Q96RY7 1462 aa30.15■■■□□ 2.42
AC108449.3-201ENST00000560714 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
AC108449.3-201ENST00000560714 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
AC108449.3-201ENST00000560714 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
AC108449.3-201ENST00000560714 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
AC108449.3-201ENST00000560714 EIF4G3O43432 1585 aaKnown RBP29.92■■■□□ 2.38
AC108449.3-201ENST00000560714 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
AC108449.3-201ENST00000560714 POLA1P09884 1462 aaPredicted RBP29.83■■■□□ 2.37
AC108449.3-201ENST00000560714 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.36
AC108449.3-201ENST00000560714 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
AC108449.3-201ENST00000560714 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
AC108449.3-201ENST00000560714 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
AC108449.3-201ENST00000560714 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
AC108449.3-201ENST00000560714 SOGA1O94964 1423 aa29.71■■■□□ 2.35
AC108449.3-201ENST00000560714 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
AC108449.3-201ENST00000560714 CHD1O14646 1710 aa29.67■■■□□ 2.34
AC108449.3-201ENST00000560714 FGD5Q6ZNL6 1462 aa29.65■■■□□ 2.34
AC108449.3-201ENST00000560714 FBLN2P98095 1184 aa29.64■■■□□ 2.34
AC108449.3-201ENST00000560714 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.33
AC108449.3-201ENST00000560714 CUX1P39880 1505 aa29.61■■■□□ 2.33
AC108449.3-201ENST00000560714 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
AC108449.3-201ENST00000560714 SUPT5HO00267 1087 aaKnown RBP29.56■■■□□ 2.32
AC108449.3-201ENST00000560714 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
AC108449.3-201ENST00000560714 CYB5RLQ6IPT4 315 aa29.48■■■□□ 2.31
AC108449.3-201ENST00000560714 GRIN2BQ13224 1484 aa29.46■■■□□ 2.31
AC108449.3-201ENST00000560714 MAGI1Q96QZ7 1491 aaPredicted RBP29.46■■■□□ 2.31
AC108449.3-201ENST00000560714 CHMP7Q8WUX9 453 aaPredicted RBP29.43■■■□□ 2.3
AC108449.3-201ENST00000560714 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
AC108449.3-201ENST00000560714 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
AC108449.3-201ENST00000560714 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
AC108449.3-201ENST00000560714 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
AC108449.3-201ENST00000560714 CLASP1Q7Z460 1538 aa29.34■■■□□ 2.29
AC108449.3-201ENST00000560714 ABCA10Q8WWZ4 1543 aa29.32■■■□□ 2.28
AC108449.3-201ENST00000560714 PBRM1Q86U86 1689 aa29.31■■■□□ 2.28
AC108449.3-201ENST00000560714 ABCA5Q8WWZ7 1642 aa29.27■■■□□ 2.28
AC108449.3-201ENST00000560714 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
AC108449.3-201ENST00000560714 TRHP20396 242 aaPredicted RBP29.17■■■□□ 2.26
AC108449.3-201ENST00000560714 TOP2BQ02880 1626 aa29.16■■■□□ 2.26
AC108449.3-201ENST00000560714 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
AC108449.3-201ENST00000560714 GRIN2AQ12879 1464 aa29.07■■■□□ 2.24
AC108449.3-201ENST00000560714 ADAMTS12P58397 1594 aa29.05■■■□□ 2.24
AC108449.3-201ENST00000560714 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
AC108449.3-201ENST00000560714 NUP160Q12769 1436 aa28.96■■■□□ 2.23
AC108449.3-201ENST00000560714 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
AC108449.3-201ENST00000560714 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
AC108449.3-201ENST00000560714 ERCC6L2Q5T890 1561 aa28.86■■■□□ 2.21
AC108449.3-201ENST00000560714 SHROOM2Q13796 1616 aa28.81■■■□□ 2.2
AC108449.3-201ENST00000560714 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
AC108449.3-201ENST00000560714 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
AC108449.3-201ENST00000560714 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.18
AC108449.3-201ENST00000560714 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms