Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DPB1P04440 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 AP003680.1-201ENST00000598970 3660 ntBASIC14.52□□□□□ -0.08
HLA-DPB1P04440 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DPB1P04440 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 AC098831.1-202ENST00000438821 336 ntBASIC14.52□□□□□ -0.09
HLA-DPB1P04440 FDX1P1-201ENST00000449115 551 ntBASIC14.52□□□□□ -0.09
HLA-DPB1P04440 PAWRP1-201ENST00000451083 565 ntBASIC14.52□□□□□ -0.09
HLA-DPB1P04440 AC087163.2-201ENST00000457299 853 ntBASIC14.52□□□□□ -0.09
HLA-DPB1P04440 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.52□□□□□ -0.09
HLA-DPB1P04440 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPB1P04440 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPB1P04440 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms