RNA–Protein interactions for RNA: ENST00000606498.5

TM2D1-212, Transcript of TM2 domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TM2D1, Length 969 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-212ENST00000606498 NISCHQ9Y2I1 1504 aa42.94■■■■■ 4.46
TM2D1-212ENST00000606498 CCDC180Q9P1Z9 1646 aa38.47■■■■□ 3.75
TM2D1-212ENST00000606498 ABCC9O60706 1549 aa37.75■■■■□ 3.63
TM2D1-212ENST00000606498 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
TM2D1-212ENST00000606498 NACADO15069 1562 aa36.08■■■■□ 3.37
TM2D1-212ENST00000606498 ZCCHC6Q5VYS8 1495 aaKnown RBP35.78■■■■□ 3.32
TM2D1-212ENST00000606498 MYO15BQ96JP2 1530 aa35.77■■■■□ 3.32
TM2D1-212ENST00000606498 UNC13AQ9UPW8 1703 aa35.67■■■■□ 3.3
TM2D1-212ENST00000606498 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
TM2D1-212ENST00000606498 DCAF1Q9Y4B6 1507 aa35.52■■■■□ 3.28
TM2D1-212ENST00000606498 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
TM2D1-212ENST00000606498 PABPN1Q86U42 306 aaKnown RBP eCLIP35.07■■■■□ 3.2
TM2D1-212ENST00000606498 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
TM2D1-212ENST00000606498 DNAJC5BQ9UF47 199 aa34.83■■■■□ 3.17
TM2D1-212ENST00000606498 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
TM2D1-212ENST00000606498 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
TM2D1-212ENST00000606498 CC2D2AQ9P2K1 1620 aa34.22■■■■□ 3.07
TM2D1-212ENST00000606498 CECR2Q9BXF3 1484 aa33.92■■■■□ 3.02
TM2D1-212ENST00000606498 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
TM2D1-212ENST00000606498 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
TM2D1-212ENST00000606498 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
TM2D1-212ENST00000606498 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
TM2D1-212ENST00000606498 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
TM2D1-212ENST00000606498 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
TM2D1-212ENST00000606498 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
TM2D1-212ENST00000606498 MROH2BQ7Z745 1585 aa33.12■■■□□ 2.89
TM2D1-212ENST00000606498 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
TM2D1-212ENST00000606498 WIZO95785 1651 aa32.82■■■□□ 2.84
TM2D1-212ENST00000606498 NESP48681 1621 aa32.63■■■□□ 2.81
TM2D1-212ENST00000606498 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
TM2D1-212ENST00000606498 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
TM2D1-212ENST00000606498 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
TM2D1-212ENST00000606498 TOP2AP11388 1531 aaKnown RBP32.41■■■□□ 2.78
TM2D1-212ENST00000606498 KIF21AQ7Z4S6 1674 aa32.39■■■□□ 2.78
TM2D1-212ENST00000606498 THOC2Q8NI27 1593 aaKnown RBP32.34■■■□□ 2.77
TM2D1-212ENST00000606498 CUX2O14529 1486 aa32.31■■■□□ 2.76
TM2D1-212ENST00000606498 CADPSQ9ULU8 1353 aa32.19■■■□□ 2.74
TM2D1-212ENST00000606498 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
TM2D1-212ENST00000606498 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
TM2D1-212ENST00000606498 CFTRP13569 1480 aa32.03■■■□□ 2.72
TM2D1-212ENST00000606498 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
TM2D1-212ENST00000606498 CCDC88BA6NC98 1476 aa31.93■■■□□ 2.7
TM2D1-212ENST00000606498 WDR62O43379 1518 aa31.93■■■□□ 2.7
TM2D1-212ENST00000606498 FANCD2Q9BXW9 1451 aa31.91■■■□□ 2.7
TM2D1-212ENST00000606498 CEP164Q9UPV0 1460 aa31.91■■■□□ 2.7
TM2D1-212ENST00000606498 URB2Q14146 1524 aaKnown RBP31.69■■■□□ 2.66
TM2D1-212ENST00000606498 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TM2D1-212ENST00000606498 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
TM2D1-212ENST00000606498 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.61
TM2D1-212ENST00000606498 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
TM2D1-212ENST00000606498 ABCC8Q09428 1581 aa31.26■■■□□ 2.59
TM2D1-212ENST00000606498 IFT140Q96RY7 1462 aa31.22■■■□□ 2.59
TM2D1-212ENST00000606498 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
TM2D1-212ENST00000606498 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
TM2D1-212ENST00000606498 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
TM2D1-212ENST00000606498 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
TM2D1-212ENST00000606498 CUX1P39880 1505 aa31.11■■■□□ 2.57
TM2D1-212ENST00000606498 FGD5Q6ZNL6 1462 aa31.01■■■□□ 2.56
TM2D1-212ENST00000606498 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
TM2D1-212ENST00000606498 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
TM2D1-212ENST00000606498 AQRO60306 1485 aaKnown RBP eCLIP30.88■■■□□ 2.53
TM2D1-212ENST00000606498 CHD1O14646 1710 aa30.87■■■□□ 2.53
TM2D1-212ENST00000606498 SOGA1O94964 1423 aa30.85■■■□□ 2.53
TM2D1-212ENST00000606498 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
TM2D1-212ENST00000606498 SYNJ1O43426 1573 aa30.8■■■□□ 2.52
TM2D1-212ENST00000606498 TOP2BQ02880 1626 aa30.77■■■□□ 2.52
TM2D1-212ENST00000606498 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
TM2D1-212ENST00000606498 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
TM2D1-212ENST00000606498 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
TM2D1-212ENST00000606498 OSCARQ8IYS5 282 aa30.68■■■□□ 2.5
TM2D1-212ENST00000606498 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
TM2D1-212ENST00000606498 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
TM2D1-212ENST00000606498 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
TM2D1-212ENST00000606498 GRIN2BQ13224 1484 aa30.59■■■□□ 2.49
TM2D1-212ENST00000606498 MAGI1Q96QZ7 1491 aaPredicted RBP30.58■■■□□ 2.49
TM2D1-212ENST00000606498 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
TM2D1-212ENST00000606498 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
TM2D1-212ENST00000606498 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
TM2D1-212ENST00000606498 GAPVD1Q14C86 1478 aa30.56■■■□□ 2.48
TM2D1-212ENST00000606498 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
TM2D1-212ENST00000606498 SYNJ2O15056 1496 aa30.46■■■□□ 2.47
TM2D1-212ENST00000606498 CLASP1Q7Z460 1538 aa30.46■■■□□ 2.47
TM2D1-212ENST00000606498 ADAMTS12P58397 1594 aa30.44■■■□□ 2.46
TM2D1-212ENST00000606498 FBLN2P98095 1184 aa30.39■■■□□ 2.46
TM2D1-212ENST00000606498 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
TM2D1-212ENST00000606498 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
TM2D1-212ENST00000606498 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
TM2D1-212ENST00000606498 CHMP7Q8WUX9 453 aaPredicted RBP30.25■■■□□ 2.43
TM2D1-212ENST00000606498 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
TM2D1-212ENST00000606498 CEP170Q5SW79 1584 aa30.23■■■□□ 2.43
TM2D1-212ENST00000606498 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
TM2D1-212ENST00000606498 NUP160Q12769 1436 aa30.13■■■□□ 2.41
TM2D1-212ENST00000606498 SHROOM2Q13796 1616 aa30.07■■■□□ 2.4
TM2D1-212ENST00000606498 CUL7Q14999 1698 aa30.06■■■□□ 2.4
TM2D1-212ENST00000606498 ERCC6L2Q5T890 1561 aa30.03■■■□□ 2.4
TM2D1-212ENST00000606498 RUSC2Q8N2Y8 1516 aa30.02■■■□□ 2.4
TM2D1-212ENST00000606498 KIF27Q86VH2 1401 aa30.01■■■□□ 2.39
TM2D1-212ENST00000606498 CYB5RLQ6IPT4 315 aa29.95■■■□□ 2.39
TM2D1-212ENST00000606498 IGF1RP08069 1367 aa29.9■■■□□ 2.38
TM2D1-212ENST00000606498 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms