RNA–Protein interactions for RNA: ENST00000394148.7

CSF3-203, Transcript of colony stimulating factor 3, humanhuman

TSL 3 BASIC

Gene CSF3, Length 622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-203ENST00000394148 NISCHQ9Y2I1 1504 aa42.9■■■■■ 4.46
CSF3-203ENST00000394148 CCDC180Q9P1Z9 1646 aa38.3■■■■□ 3.72
CSF3-203ENST00000394148 ABCC9O60706 1549 aa38.02■■■■□ 3.68
CSF3-203ENST00000394148 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
CSF3-203ENST00000394148 NACADO15069 1562 aa36.1■■■■□ 3.37
CSF3-203ENST00000394148 DCAF8L2P0C7V8 631 aa36.02■■■■□ 3.36
CSF3-203ENST00000394148 MYO15BQ96JP2 1530 aa35.71■■■■□ 3.31
CSF3-203ENST00000394148 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
CSF3-203ENST00000394148 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
CSF3-203ENST00000394148 PABPN1Q86U42 306 aaKnown RBP eCLIP35.45■■■■□ 3.27
CSF3-203ENST00000394148 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
CSF3-203ENST00000394148 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
CSF3-203ENST00000394148 BICRAQ9NZM4 1560 aa35.28■■■■□ 3.24
CSF3-203ENST00000394148 SCRIBQ14160 1630 aa35.01■■■■□ 3.19
CSF3-203ENST00000394148 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
CSF3-203ENST00000394148 AEBP2Q6ZN18 517 aaPredicted RBP34.51■■■■□ 3.12
CSF3-203ENST00000394148 EIF4G1Q04637 1599 aaKnown RBP34.36■■■■□ 3.09
CSF3-203ENST00000394148 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
CSF3-203ENST00000394148 CECR2Q9BXF3 1484 aa34.17■■■■□ 3.06
CSF3-203ENST00000394148 SMARCA4P51532 1647 aa33.4■■■□□ 2.94
CSF3-203ENST00000394148 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
CSF3-203ENST00000394148 ATAD2BQ9ULI0 1458 aa33.32■■■□□ 2.92
CSF3-203ENST00000394148 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
CSF3-203ENST00000394148 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
CSF3-203ENST00000394148 HMGXB3Q12766 1538 aa33.14■■■□□ 2.9
CSF3-203ENST00000394148 MROH2BQ7Z745 1585 aa33.1■■■□□ 2.89
CSF3-203ENST00000394148 PEG3Q9GZU2 1588 aa33.04■■■□□ 2.88
CSF3-203ENST00000394148 BAZ1BQ9UIG0 1483 aaKnown RBP33.02■■■□□ 2.88
CSF3-203ENST00000394148 NESP48681 1621 aa32.78■■■□□ 2.84
CSF3-203ENST00000394148 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
CSF3-203ENST00000394148 CHIC1Q5VXU3 224 aa32.72■■■□□ 2.83
CSF3-203ENST00000394148 WIZO95785 1651 aa32.72■■■□□ 2.83
CSF3-203ENST00000394148 CUX2O14529 1486 aa32.54■■■□□ 2.8
CSF3-203ENST00000394148 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
CSF3-203ENST00000394148 RSF1Q96T23 1441 aaPredicted RBP32.52■■■□□ 2.8
CSF3-203ENST00000394148 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
CSF3-203ENST00000394148 KIF21AQ7Z4S6 1674 aa32.35■■■□□ 2.77
CSF3-203ENST00000394148 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
CSF3-203ENST00000394148 PDS5BQ9NTI5 1447 aa32.31■■■□□ 2.76
CSF3-203ENST00000394148 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
CSF3-203ENST00000394148 DNAJC5Q9H3Z4 198 aa32.08■■■□□ 2.73
CSF3-203ENST00000394148 CFTRP13569 1480 aa32.07■■■□□ 2.72
CSF3-203ENST00000394148 MRC2Q9UBG0 1479 aa32.06■■■□□ 2.72
CSF3-203ENST00000394148 FANCD2Q9BXW9 1451 aa32.01■■■□□ 2.71
CSF3-203ENST00000394148 CEP164Q9UPV0 1460 aa32■■■□□ 2.71
CSF3-203ENST00000394148 WDR62O43379 1518 aa31.98■■■□□ 2.71
CSF3-203ENST00000394148 CCDC88BA6NC98 1476 aa31.94■■■□□ 2.7
CSF3-203ENST00000394148 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
CSF3-203ENST00000394148 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
CSF3-203ENST00000394148 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
CSF3-203ENST00000394148 DNMBPQ6XZF7 1577 aa31.37■■■□□ 2.61
CSF3-203ENST00000394148 SUPT5HO00267 1087 aaKnown RBP31.36■■■□□ 2.61
CSF3-203ENST00000394148 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
CSF3-203ENST00000394148 ZNF608Q9ULD9 1512 aaPredicted RBP31.32■■■□□ 2.6
CSF3-203ENST00000394148 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
CSF3-203ENST00000394148 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
CSF3-203ENST00000394148 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
CSF3-203ENST00000394148 EIF4G3O43432 1585 aaKnown RBP31.15■■■□□ 2.58
CSF3-203ENST00000394148 CUX1P39880 1505 aa31.08■■■□□ 2.57
CSF3-203ENST00000394148 OSCARQ8IYS5 282 aa31.07■■■□□ 2.56
CSF3-203ENST00000394148 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
CSF3-203ENST00000394148 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
CSF3-203ENST00000394148 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
CSF3-203ENST00000394148 SOGA1O94964 1423 aa30.98■■■□□ 2.55
CSF3-203ENST00000394148 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
CSF3-203ENST00000394148 TRIM41Q8WV44 630 aa30.89■■■□□ 2.54
CSF3-203ENST00000394148 CHD1O14646 1710 aa30.84■■■□□ 2.53
CSF3-203ENST00000394148 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
CSF3-203ENST00000394148 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
CSF3-203ENST00000394148 FBLN2P98095 1184 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
CSF3-203ENST00000394148 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
CSF3-203ENST00000394148 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
CSF3-203ENST00000394148 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
CSF3-203ENST00000394148 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
CSF3-203ENST00000394148 WRNQ14191 1432 aaPredicted RBP eCLIP30.65■■■□□ 2.5
CSF3-203ENST00000394148 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
CSF3-203ENST00000394148 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
CSF3-203ENST00000394148 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
CSF3-203ENST00000394148 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
CSF3-203ENST00000394148 ABCA5Q8WWZ7 1642 aa30.62■■■□□ 2.49
CSF3-203ENST00000394148 PBRM1Q86U86 1689 aa30.62■■■□□ 2.49
CSF3-203ENST00000394148 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
CSF3-203ENST00000394148 SYNJ2O15056 1496 aa30.54■■■□□ 2.48
CSF3-203ENST00000394148 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
CSF3-203ENST00000394148 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
CSF3-203ENST00000394148 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
CSF3-203ENST00000394148 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
CSF3-203ENST00000394148 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
CSF3-203ENST00000394148 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CSF3-203ENST00000394148 FHAD1B1AJZ9 1412 aa30.24■■■□□ 2.43
CSF3-203ENST00000394148 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
CSF3-203ENST00000394148 NUP160Q12769 1436 aa30.2■■■□□ 2.42
CSF3-203ENST00000394148 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
CSF3-203ENST00000394148 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
CSF3-203ENST00000394148 SHROOM2Q13796 1616 aa30.02■■■□□ 2.4
CSF3-203ENST00000394148 IGF1RP08069 1367 aa29.98■■■□□ 2.39
CSF3-203ENST00000394148 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms