RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 NISCHQ9Y2I1 1504 aa35.69■■■■□ 3.3
SPDEF-202ENST00000544425 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
SPDEF-202ENST00000544425 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
SPDEF-202ENST00000544425 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
SPDEF-202ENST00000544425 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
SPDEF-202ENST00000544425 SHROOM4Q9ULL8 1493 aa29.25■■■□□ 2.27
SPDEF-202ENST00000544425 MYO15BQ96JP2 1530 aa29.11■■■□□ 2.25
SPDEF-202ENST00000544425 ABCC9O60706 1549 aa29.02■■■□□ 2.24
SPDEF-202ENST00000544425 NACADO15069 1562 aa28.8■■■□□ 2.2
SPDEF-202ENST00000544425 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.15
SPDEF-202ENST00000544425 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
SPDEF-202ENST00000544425 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
SPDEF-202ENST00000544425 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
SPDEF-202ENST00000544425 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
SPDEF-202ENST00000544425 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.03
SPDEF-202ENST00000544425 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
SPDEF-202ENST00000544425 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
SPDEF-202ENST00000544425 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
SPDEF-202ENST00000544425 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
SPDEF-202ENST00000544425 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
SPDEF-202ENST00000544425 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
SPDEF-202ENST00000544425 WIZO95785 1651 aa27.29■■□□□ 1.96
SPDEF-202ENST00000544425 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
SPDEF-202ENST00000544425 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
SPDEF-202ENST00000544425 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
SPDEF-202ENST00000544425 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
SPDEF-202ENST00000544425 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
SPDEF-202ENST00000544425 EIF4G1Q04637 1599 aaKnown RBP26.73■■□□□ 1.87
SPDEF-202ENST00000544425 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.87
SPDEF-202ENST00000544425 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
SPDEF-202ENST00000544425 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
SPDEF-202ENST00000544425 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
SPDEF-202ENST00000544425 ABCC8Q09428 1581 aa26.27■■□□□ 1.8
SPDEF-202ENST00000544425 LOC105371045A0A1W2PR82 267 aa26.26■■□□□ 1.79
SPDEF-202ENST00000544425 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
SPDEF-202ENST00000544425 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
SPDEF-202ENST00000544425 FAM9AQ8IZU1 332 aaPredicted RBP26.13■■□□□ 1.77
SPDEF-202ENST00000544425 CFTRP13569 1480 aa26.1■■□□□ 1.77
SPDEF-202ENST00000544425 EEA1Q15075 1411 aa25.97■■□□□ 1.75
SPDEF-202ENST00000544425 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
SPDEF-202ENST00000544425 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
SPDEF-202ENST00000544425 SOGA1O94964 1423 aa25.92■■□□□ 1.74
SPDEF-202ENST00000544425 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
SPDEF-202ENST00000544425 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
SPDEF-202ENST00000544425 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.72
SPDEF-202ENST00000544425 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
SPDEF-202ENST00000544425 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
SPDEF-202ENST00000544425 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
SPDEF-202ENST00000544425 CUX1P39880 1505 aa25.74■■□□□ 1.71
SPDEF-202ENST00000544425 EHMT2Q96KQ7 1210 aa25.69■■□□□ 1.7
SPDEF-202ENST00000544425 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
SPDEF-202ENST00000544425 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
SPDEF-202ENST00000544425 TNIKQ9UKE5 1360 aa25.6■■□□□ 1.69
SPDEF-202ENST00000544425 GOLGA3Q08378 1498 aa25.57■■□□□ 1.68
SPDEF-202ENST00000544425 NESP48681 1621 aa25.56■■□□□ 1.68
SPDEF-202ENST00000544425 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
SPDEF-202ENST00000544425 KIF21BO75037 1637 aa25.52■■□□□ 1.68
SPDEF-202ENST00000544425 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
SPDEF-202ENST00000544425 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
SPDEF-202ENST00000544425 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
SPDEF-202ENST00000544425 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
SPDEF-202ENST00000544425 DNMBPQ6XZF7 1577 aa25.42■■□□□ 1.66
SPDEF-202ENST00000544425 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
SPDEF-202ENST00000544425 PRXQ9BXM0 1461 aa25.39■■□□□ 1.66
SPDEF-202ENST00000544425 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
SPDEF-202ENST00000544425 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
SPDEF-202ENST00000544425 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
SPDEF-202ENST00000544425 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
SPDEF-202ENST00000544425 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
SPDEF-202ENST00000544425 CUX2O14529 1486 aa25.32■■□□□ 1.64
SPDEF-202ENST00000544425 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
SPDEF-202ENST00000544425 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
SPDEF-202ENST00000544425 IGF1RP08069 1367 aa25.27■■□□□ 1.64
SPDEF-202ENST00000544425 ABCA10Q8WWZ4 1543 aa25.24■■□□□ 1.63
SPDEF-202ENST00000544425 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
SPDEF-202ENST00000544425 CLIP1P30622 1438 aa25.18■■□□□ 1.62
SPDEF-202ENST00000544425 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
SPDEF-202ENST00000544425 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
SPDEF-202ENST00000544425 MRC2Q9UBG0 1479 aa25.07■■□□□ 1.6
SPDEF-202ENST00000544425 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
SPDEF-202ENST00000544425 VPS8Q8N3P4 1428 aa25.01■■□□□ 1.59
SPDEF-202ENST00000544425 TDRD9Q8NDG6 1382 aaKnown RBP24.95■■□□□ 1.58
SPDEF-202ENST00000544425 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
SPDEF-202ENST00000544425 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
SPDEF-202ENST00000544425 PPARGC1BQ86YN6 1023 aaKnown RBP24.94■■□□□ 1.58
SPDEF-202ENST00000544425 GAPVD1Q14C86 1478 aa24.94■■□□□ 1.58
SPDEF-202ENST00000544425 CUL7Q14999 1698 aa24.93■■□□□ 1.58
SPDEF-202ENST00000544425 WDR62O43379 1518 aa24.92■■□□□ 1.58
SPDEF-202ENST00000544425 RANGAP1P46060 587 aaPredicted RBP24.91■■□□□ 1.58
SPDEF-202ENST00000544425 ARAP1Q96P48 1450 aa24.88■■□□□ 1.57
SPDEF-202ENST00000544425 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
SPDEF-202ENST00000544425 HRCP23327 699 aa24.85■■□□□ 1.57
SPDEF-202ENST00000544425 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
SPDEF-202ENST00000544425 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
SPDEF-202ENST00000544425 APLP2Q06481 763 aa24.79■■□□□ 1.56
SPDEF-202ENST00000544425 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.55
SPDEF-202ENST00000544425 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
SPDEF-202ENST00000544425 GRIN2BQ13224 1484 aa24.71■■□□□ 1.55
SPDEF-202ENST00000544425 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
SPDEF-202ENST00000544425 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms