RNA–Protein interactions for RNA: ENST00000377470.7

SPATC1-201, Transcript of spermatogenesis and centriole associated 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPATC1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATC1-201ENST00000377470 NISCHQ9Y2I1 1504 aa38.38■■■■□ 3.73
SPATC1-201ENST00000377470 CCDC180Q9P1Z9 1646 aa33.41■■■□□ 2.94
SPATC1-201ENST00000377470 ABCC9O60706 1549 aa32.16■■■□□ 2.74
SPATC1-201ENST00000377470 ZCCHC6Q5VYS8 1495 aaKnown RBP32.14■■■□□ 2.74
SPATC1-201ENST00000377470 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
SPATC1-201ENST00000377470 DCAF1Q9Y4B6 1507 aa31.61■■■□□ 2.65
SPATC1-201ENST00000377470 MYO15BQ96JP2 1530 aa31.34■■■□□ 2.61
SPATC1-201ENST00000377470 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
SPATC1-201ENST00000377470 NACADO15069 1562 aa31.28■■■□□ 2.6
SPATC1-201ENST00000377470 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
SPATC1-201ENST00000377470 SCRIBQ14160 1630 aa30.87■■■□□ 2.53
SPATC1-201ENST00000377470 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.46
SPATC1-201ENST00000377470 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
SPATC1-201ENST00000377470 BICRAQ9NZM4 1560 aa30.26■■■□□ 2.43
SPATC1-201ENST00000377470 CECR2Q9BXF3 1484 aa29.97■■■□□ 2.39
SPATC1-201ENST00000377470 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
SPATC1-201ENST00000377470 RSF1Q96T23 1441 aaPredicted RBP29.73■■■□□ 2.35
SPATC1-201ENST00000377470 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
SPATC1-201ENST00000377470 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
SPATC1-201ENST00000377470 SMARCA4P51532 1647 aa29.51■■■□□ 2.32
SPATC1-201ENST00000377470 WIZO95785 1651 aa29.4■■■□□ 2.3
SPATC1-201ENST00000377470 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
SPATC1-201ENST00000377470 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
SPATC1-201ENST00000377470 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
SPATC1-201ENST00000377470 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
SPATC1-201ENST00000377470 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.23
SPATC1-201ENST00000377470 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
SPATC1-201ENST00000377470 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
SPATC1-201ENST00000377470 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
SPATC1-201ENST00000377470 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
SPATC1-201ENST00000377470 CCDC88BA6NC98 1476 aa28.83■■■□□ 2.21
SPATC1-201ENST00000377470 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
SPATC1-201ENST00000377470 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
SPATC1-201ENST00000377470 CFTRP13569 1480 aa28.25■■■□□ 2.11
SPATC1-201ENST00000377470 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
SPATC1-201ENST00000377470 NESP48681 1621 aa28.17■■■□□ 2.1
SPATC1-201ENST00000377470 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
SPATC1-201ENST00000377470 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
SPATC1-201ENST00000377470 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
SPATC1-201ENST00000377470 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
SPATC1-201ENST00000377470 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
SPATC1-201ENST00000377470 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
SPATC1-201ENST00000377470 PRDM2Q13029 1718 aa27.83■■■□□ 2.05
SPATC1-201ENST00000377470 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
SPATC1-201ENST00000377470 CUX1P39880 1505 aa27.76■■■□□ 2.03
SPATC1-201ENST00000377470 CEP164Q9UPV0 1460 aa27.71■■■□□ 2.03
SPATC1-201ENST00000377470 FAM9AQ8IZU1 332 aaPredicted RBP27.7■■■□□ 2.02
SPATC1-201ENST00000377470 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
SPATC1-201ENST00000377470 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
SPATC1-201ENST00000377470 BIVM-ERCC5R4GMW8 1640 aa27.6■■■□□ 2.01
SPATC1-201ENST00000377470 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
SPATC1-201ENST00000377470 SOGA1O94964 1423 aa27.6■■■□□ 2.01
SPATC1-201ENST00000377470 TOPBP1Q92547 1522 aa27.56■■■□□ 2
SPATC1-201ENST00000377470 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
SPATC1-201ENST00000377470 ERCC6Q03468 1493 aa27.52■■■□□ 2
SPATC1-201ENST00000377470 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
SPATC1-201ENST00000377470 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
SPATC1-201ENST00000377470 LOC105371045A0A1W2PR82 267 aa27.48■■□□□ 1.99
SPATC1-201ENST00000377470 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.98
SPATC1-201ENST00000377470 POLA1P09884 1462 aaPredicted RBP27.43■■□□□ 1.98
SPATC1-201ENST00000377470 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
SPATC1-201ENST00000377470 EHMT2Q96KQ7 1210 aa27.4■■□□□ 1.98
SPATC1-201ENST00000377470 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
SPATC1-201ENST00000377470 WDR62O43379 1518 aa27.3■■□□□ 1.96
SPATC1-201ENST00000377470 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
SPATC1-201ENST00000377470 CUX2O14529 1486 aa27.28■■□□□ 1.96
SPATC1-201ENST00000377470 EEA1Q15075 1411 aa27.25■■□□□ 1.95
SPATC1-201ENST00000377470 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
SPATC1-201ENST00000377470 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
SPATC1-201ENST00000377470 TDRD9Q8NDG6 1382 aaKnown RBP27.2■■□□□ 1.94
SPATC1-201ENST00000377470 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
SPATC1-201ENST00000377470 IGF1RP08069 1367 aa27.14■■□□□ 1.93
SPATC1-201ENST00000377470 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
SPATC1-201ENST00000377470 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
SPATC1-201ENST00000377470 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
SPATC1-201ENST00000377470 WDR97A6NE52 1622 aa27.06■■□□□ 1.92
SPATC1-201ENST00000377470 GAPVD1Q14C86 1478 aa27.01■■□□□ 1.91
SPATC1-201ENST00000377470 PRXQ9BXM0 1461 aa27■■□□□ 1.91
SPATC1-201ENST00000377470 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
SPATC1-201ENST00000377470 UBTFP17480 764 aaKnown RBP26.97■■□□□ 1.91
SPATC1-201ENST00000377470 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
SPATC1-201ENST00000377470 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
SPATC1-201ENST00000377470 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
SPATC1-201ENST00000377470 KIF21BO75037 1637 aa26.92■■□□□ 1.9
SPATC1-201ENST00000377470 ERICH3Q5RHP9 1530 aa26.84■■□□□ 1.89
SPATC1-201ENST00000377470 TNIKQ9UKE5 1360 aa26.83■■□□□ 1.89
SPATC1-201ENST00000377470 GRIN2BQ13224 1484 aa26.82■■□□□ 1.88
SPATC1-201ENST00000377470 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
SPATC1-201ENST00000377470 RANGAP1P46060 587 aaPredicted RBP26.75■■□□□ 1.87
SPATC1-201ENST00000377470 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
SPATC1-201ENST00000377470 CUL7Q14999 1698 aa26.71■■□□□ 1.87
SPATC1-201ENST00000377470 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
SPATC1-201ENST00000377470 FHAD1B1AJZ9 1412 aa26.69■■□□□ 1.86
SPATC1-201ENST00000377470 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
SPATC1-201ENST00000377470 ADAMTS12P58397 1594 aa26.64■■□□□ 1.85
SPATC1-201ENST00000377470 FBLN2P98095 1184 aa26.61■■□□□ 1.85
SPATC1-201ENST00000377470 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
SPATC1-201ENST00000377470 MAGI1Q96QZ7 1491 aaPredicted RBP26.58■■□□□ 1.85
SPATC1-201ENST00000377470 CLIP1P30622 1438 aa26.55■■□□□ 1.84
SPATC1-201ENST00000377470 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms