RNA–Protein interactions for RNA: ENST00000564828.5

CDIP1-207, Transcript of cell death inducing p53 target 1, humanhuman

TSL 1 (best) BASIC

Gene CDIP1, Length 1,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-207ENST00000564828 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
CDIP1-207ENST00000564828 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
CDIP1-207ENST00000564828 ABCC9O60706 1549 aa33.07■■■□□ 2.88
CDIP1-207ENST00000564828 ZCCHC6Q5VYS8 1495 aaKnown RBP33.02■■■□□ 2.88
CDIP1-207ENST00000564828 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
CDIP1-207ENST00000564828 DCAF8L2P0C7V8 631 aa32.44■■■□□ 2.78
CDIP1-207ENST00000564828 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
CDIP1-207ENST00000564828 NACADO15069 1562 aa32.31■■■□□ 2.76
CDIP1-207ENST00000564828 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
CDIP1-207ENST00000564828 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
CDIP1-207ENST00000564828 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
CDIP1-207ENST00000564828 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
CDIP1-207ENST00000564828 BICRAQ9NZM4 1560 aa31.27■■■□□ 2.6
CDIP1-207ENST00000564828 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
CDIP1-207ENST00000564828 CECR2Q9BXF3 1484 aa30.64■■■□□ 2.49
CDIP1-207ENST00000564828 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
CDIP1-207ENST00000564828 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
CDIP1-207ENST00000564828 MROH2BQ7Z745 1585 aa30.42■■■□□ 2.46
CDIP1-207ENST00000564828 RSF1Q96T23 1441 aaPredicted RBP30.32■■■□□ 2.44
CDIP1-207ENST00000564828 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
CDIP1-207ENST00000564828 WIZO95785 1651 aa30.19■■■□□ 2.42
CDIP1-207ENST00000564828 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
CDIP1-207ENST00000564828 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
CDIP1-207ENST00000564828 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
CDIP1-207ENST00000564828 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
CDIP1-207ENST00000564828 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
CDIP1-207ENST00000564828 TOP2AP11388 1531 aaKnown RBP29.83■■■□□ 2.37
CDIP1-207ENST00000564828 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
CDIP1-207ENST00000564828 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
CDIP1-207ENST00000564828 BAZ1BQ9UIG0 1483 aaKnown RBP29.76■■■□□ 2.35
CDIP1-207ENST00000564828 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
CDIP1-207ENST00000564828 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
CDIP1-207ENST00000564828 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
CDIP1-207ENST00000564828 CFTRP13569 1480 aa29■■■□□ 2.23
CDIP1-207ENST00000564828 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
CDIP1-207ENST00000564828 NESP48681 1621 aa28.92■■■□□ 2.22
CDIP1-207ENST00000564828 LAMC3Q9Y6N6 1575 aa28.91■■■□□ 2.22
CDIP1-207ENST00000564828 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
CDIP1-207ENST00000564828 KIF21AQ7Z4S6 1674 aa28.68■■■□□ 2.18
CDIP1-207ENST00000564828 CHIC1Q5VXU3 224 aa28.68■■■□□ 2.18
CDIP1-207ENST00000564828 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
CDIP1-207ENST00000564828 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
CDIP1-207ENST00000564828 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
CDIP1-207ENST00000564828 WRNQ14191 1432 aaPredicted RBP eCLIP28.54■■■□□ 2.16
CDIP1-207ENST00000564828 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
CDIP1-207ENST00000564828 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
CDIP1-207ENST00000564828 CUX1P39880 1505 aa28.48■■■□□ 2.15
CDIP1-207ENST00000564828 TOP2BQ02880 1626 aa28.45■■■□□ 2.14
CDIP1-207ENST00000564828 TRIM41Q8WV44 630 aa28.39■■■□□ 2.13
CDIP1-207ENST00000564828 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
CDIP1-207ENST00000564828 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
CDIP1-207ENST00000564828 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
CDIP1-207ENST00000564828 TOPBP1Q92547 1522 aa28.34■■■□□ 2.13
CDIP1-207ENST00000564828 THOC2Q8NI27 1593 aaKnown RBP28.33■■■□□ 2.13
CDIP1-207ENST00000564828 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
CDIP1-207ENST00000564828 WDR62O43379 1518 aa28.25■■■□□ 2.11
CDIP1-207ENST00000564828 FGD5Q6ZNL6 1462 aa28.22■■■□□ 2.11
CDIP1-207ENST00000564828 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
CDIP1-207ENST00000564828 WDR97A6NE52 1622 aa28.07■■■□□ 2.08
CDIP1-207ENST00000564828 RAD54L2Q9Y4B4 1467 aa28.04■■■□□ 2.08
CDIP1-207ENST00000564828 SOGA1O94964 1423 aa28.03■■■□□ 2.08
CDIP1-207ENST00000564828 CUX2O14529 1486 aa28.02■■■□□ 2.08
CDIP1-207ENST00000564828 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
CDIP1-207ENST00000564828 RUSC2Q8N2Y8 1516 aa28■■■□□ 2.07
CDIP1-207ENST00000564828 ABCA10Q8WWZ4 1543 aa27.96■■■□□ 2.07
CDIP1-207ENST00000564828 IFT140Q96RY7 1462 aa27.88■■■□□ 2.05
CDIP1-207ENST00000564828 FAM9AQ8IZU1 332 aaPredicted RBP27.86■■■□□ 2.05
CDIP1-207ENST00000564828 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
CDIP1-207ENST00000564828 EEA1Q15075 1411 aa27.85■■■□□ 2.05
CDIP1-207ENST00000564828 KIF27Q86VH2 1401 aa27.83■■■□□ 2.05
CDIP1-207ENST00000564828 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
CDIP1-207ENST00000564828 TDRD9Q8NDG6 1382 aaKnown RBP27.75■■■□□ 2.03
CDIP1-207ENST00000564828 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
CDIP1-207ENST00000564828 PBRM1Q86U86 1689 aa27.74■■■□□ 2.03
CDIP1-207ENST00000564828 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
CDIP1-207ENST00000564828 CSRNP3Q8WYN3 585 aa27.69■■■□□ 2.02
CDIP1-207ENST00000564828 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
CDIP1-207ENST00000564828 IGF1RP08069 1367 aa27.63■■■□□ 2.01
CDIP1-207ENST00000564828 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
CDIP1-207ENST00000564828 KIF21BO75037 1637 aa27.63■■■□□ 2.01
CDIP1-207ENST00000564828 CUL7Q14999 1698 aa27.59■■■□□ 2.01
CDIP1-207ENST00000564828 PRXQ9BXM0 1461 aa27.58■■■□□ 2.01
CDIP1-207ENST00000564828 GRIN2BQ13224 1484 aa27.56■■■□□ 2
CDIP1-207ENST00000564828 LOC105371045A0A1W2PR82 267 aa27.53■■■□□ 2
CDIP1-207ENST00000564828 ADAMTS12P58397 1594 aa27.51■■□□□ 1.99
CDIP1-207ENST00000564828 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
CDIP1-207ENST00000564828 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
CDIP1-207ENST00000564828 EHMT2Q96KQ7 1210 aa27.47■■□□□ 1.99
CDIP1-207ENST00000564828 GOLGA3Q08378 1498 aa27.47■■□□□ 1.99
CDIP1-207ENST00000564828 SNAPC4Q5SXM2 1469 aa27.46■■□□□ 1.99
CDIP1-207ENST00000564828 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
CDIP1-207ENST00000564828 FHAD1B1AJZ9 1412 aa27.38■■□□□ 1.97
CDIP1-207ENST00000564828 SYNJ2O15056 1496 aa27.29■■□□□ 1.96
CDIP1-207ENST00000564828 CTTNBP2Q8WZ74 1663 aa27.28■■□□□ 1.96
CDIP1-207ENST00000564828 CHD1O14646 1710 aa27.27■■□□□ 1.96
CDIP1-207ENST00000564828 TNIKQ9UKE5 1360 aa27.26■■□□□ 1.95
CDIP1-207ENST00000564828 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
CDIP1-207ENST00000564828 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
CDIP1-207ENST00000564828 CEP170Q5SW79 1584 aa27.15■■□□□ 1.94
CDIP1-207ENST00000564828 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms