RNA–Protein interactions for RNA: ENST00000571253.1

GABARAP-204, Transcript of GABA type A receptor-associated protein, humanhuman

TSL 2 BASIC

Gene GABARAP, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAP-204ENST00000571253 NISCHQ9Y2I1 1504 aa43■■■■■ 4.47
GABARAP-204ENST00000571253 CCDC180Q9P1Z9 1646 aa38.49■■■■□ 3.75
GABARAP-204ENST00000571253 ABCC9O60706 1549 aa38.12■■■■□ 3.69
GABARAP-204ENST00000571253 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
GABARAP-204ENST00000571253 NACADO15069 1562 aa36.32■■■■□ 3.4
GABARAP-204ENST00000571253 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
GABARAP-204ENST00000571253 MYO15BQ96JP2 1530 aa35.94■■■■□ 3.34
GABARAP-204ENST00000571253 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
GABARAP-204ENST00000571253 UNC13AQ9UPW8 1703 aa35.64■■■■□ 3.3
GABARAP-204ENST00000571253 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
GABARAP-204ENST00000571253 PABPN1Q86U42 306 aaKnown RBP eCLIP35.53■■■■□ 3.28
GABARAP-204ENST00000571253 DNAJC5BQ9UF47 199 aa35.51■■■■□ 3.28
GABARAP-204ENST00000571253 BICRAQ9NZM4 1560 aa35.38■■■■□ 3.25
GABARAP-204ENST00000571253 SCRIBQ14160 1630 aa35.01■■■■□ 3.19
GABARAP-204ENST00000571253 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
GABARAP-204ENST00000571253 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
GABARAP-204ENST00000571253 CC2D2AQ9P2K1 1620 aa34.48■■■■□ 3.11
GABARAP-204ENST00000571253 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
GABARAP-204ENST00000571253 NCAPD3P42695 1498 aa33.52■■■□□ 2.96
GABARAP-204ENST00000571253 SMARCA4P51532 1647 aa33.47■■■□□ 2.95
GABARAP-204ENST00000571253 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
GABARAP-204ENST00000571253 SMARCA2P51531 1590 aa33.38■■■□□ 2.93
GABARAP-204ENST00000571253 BAZ1AQ9NRL2 1556 aaPredicted RBP33.37■■■□□ 2.93
GABARAP-204ENST00000571253 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
GABARAP-204ENST00000571253 PEG3Q9GZU2 1588 aa33.18■■■□□ 2.9
GABARAP-204ENST00000571253 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
GABARAP-204ENST00000571253 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
GABARAP-204ENST00000571253 ERCC6Q03468 1493 aa32.91■■■□□ 2.86
GABARAP-204ENST00000571253 NESP48681 1621 aa32.83■■■□□ 2.85
GABARAP-204ENST00000571253 CUX2O14529 1486 aa32.8■■■□□ 2.84
GABARAP-204ENST00000571253 WIZO95785 1651 aa32.73■■■□□ 2.83
GABARAP-204ENST00000571253 LAMC3Q9Y6N6 1575 aa32.72■■■□□ 2.83
GABARAP-204ENST00000571253 RSF1Q96T23 1441 aaPredicted RBP32.54■■■□□ 2.8
GABARAP-204ENST00000571253 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.8
GABARAP-204ENST00000571253 CADPSQ9ULU8 1353 aa32.5■■■□□ 2.79
GABARAP-204ENST00000571253 THOC2Q8NI27 1593 aaKnown RBP32.46■■■□□ 2.79
GABARAP-204ENST00000571253 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
GABARAP-204ENST00000571253 KIF21AQ7Z4S6 1674 aa32.45■■■□□ 2.79
GABARAP-204ENST00000571253 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
GABARAP-204ENST00000571253 CFTRP13569 1480 aa32.19■■■□□ 2.74
GABARAP-204ENST00000571253 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
GABARAP-204ENST00000571253 CEP164Q9UPV0 1460 aa32.11■■■□□ 2.73
GABARAP-204ENST00000571253 WDR62O43379 1518 aa32.1■■■□□ 2.73
GABARAP-204ENST00000571253 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
GABARAP-204ENST00000571253 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
GABARAP-204ENST00000571253 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
GABARAP-204ENST00000571253 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
GABARAP-204ENST00000571253 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
GABARAP-204ENST00000571253 TOPBP1Q92547 1522 aa31.54■■■□□ 2.64
GABARAP-204ENST00000571253 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
GABARAP-204ENST00000571253 DNMBPQ6XZF7 1577 aa31.46■■■□□ 2.63
GABARAP-204ENST00000571253 ZNF608Q9ULD9 1512 aaPredicted RBP31.36■■■□□ 2.61
GABARAP-204ENST00000571253 OSCARQ8IYS5 282 aa31.36■■■□□ 2.61
GABARAP-204ENST00000571253 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
GABARAP-204ENST00000571253 TARBP1Q13395 1621 aaKnown RBP31.25■■■□□ 2.59
GABARAP-204ENST00000571253 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
GABARAP-204ENST00000571253 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
GABARAP-204ENST00000571253 AQRO60306 1485 aaKnown RBP eCLIP31.13■■■□□ 2.577e-6■□□□□ 9.8
GABARAP-204ENST00000571253 SOGA1O94964 1423 aa31.11■■■□□ 2.57
GABARAP-204ENST00000571253 RAD54L2Q9Y4B4 1467 aa31.09■■■□□ 2.57
GABARAP-204ENST00000571253 CUX1P39880 1505 aa31.08■■■□□ 2.57
GABARAP-204ENST00000571253 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
GABARAP-204ENST00000571253 FGD5Q6ZNL6 1462 aa31.07■■■□□ 2.56
GABARAP-204ENST00000571253 WDR97A6NE52 1622 aa31■■■□□ 2.55
GABARAP-204ENST00000571253 TDRD9Q8NDG6 1382 aaKnown RBP30.98■■■□□ 2.55
GABARAP-204ENST00000571253 CHD1O14646 1710 aa30.94■■■□□ 2.54
GABARAP-204ENST00000571253 RIMBP3CA6NJZ7 1639 aa30.88■■■□□ 2.53
GABARAP-204ENST00000571253 RIMBP3BA6NNM3 1639 aa30.88■■■□□ 2.53
GABARAP-204ENST00000571253 RIMBP3Q9UFD9 1639 aa30.88■■■□□ 2.53
GABARAP-204ENST00000571253 FBLN2P98095 1184 aa30.86■■■□□ 2.53
GABARAP-204ENST00000571253 GRIN2BQ13224 1484 aa30.81■■■□□ 2.52
GABARAP-204ENST00000571253 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
GABARAP-204ENST00000571253 ARHGEF11O15085 1522 aa30.8■■■□□ 2.52
GABARAP-204ENST00000571253 MAGI1Q96QZ7 1491 aaPredicted RBP30.78■■■□□ 2.52
GABARAP-204ENST00000571253 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
GABARAP-204ENST00000571253 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
GABARAP-204ENST00000571253 CHMP7Q8WUX9 453 aaPredicted RBP30.72■■■□□ 2.51
GABARAP-204ENST00000571253 BIVM-ERCC5R4GMW8 1640 aa30.7■■■□□ 2.51
GABARAP-204ENST00000571253 PBRM1Q86U86 1689 aa30.7■■■□□ 2.5
GABARAP-204ENST00000571253 WRNQ14191 1432 aaPredicted RBP eCLIP30.7■■■□□ 2.5
GABARAP-204ENST00000571253 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
GABARAP-204ENST00000571253 ABCA5Q8WWZ7 1642 aa30.67■■■□□ 2.5
GABARAP-204ENST00000571253 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
GABARAP-204ENST00000571253 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
GABARAP-204ENST00000571253 CLASP1Q7Z460 1538 aa30.6■■■□□ 2.49
GABARAP-204ENST00000571253 CYB5RLQ6IPT4 315 aa30.56■■■□□ 2.48
GABARAP-204ENST00000571253 ARAP1Q96P48 1450 aa30.51■■■□□ 2.48
GABARAP-204ENST00000571253 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
GABARAP-204ENST00000571253 GRIN2AQ12879 1464 aa30.4■■■□□ 2.46
GABARAP-204ENST00000571253 ERICH3Q5RHP9 1530 aa30.39■■■□□ 2.46
GABARAP-204ENST00000571253 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
GABARAP-204ENST00000571253 NUP160Q12769 1436 aa30.3■■■□□ 2.44
GABARAP-204ENST00000571253 CEP170Q5SW79 1584 aa30.27■■■□□ 2.44
GABARAP-204ENST00000571253 SHROOM2Q13796 1616 aa30.14■■■□□ 2.42
GABARAP-204ENST00000571253 TRHP20396 242 aaPredicted RBP30.13■■■□□ 2.41
GABARAP-204ENST00000571253 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
GABARAP-204ENST00000571253 KIF27Q86VH2 1401 aa30.1■■■□□ 2.41
GABARAP-204ENST00000571253 IGF1RP08069 1367 aa30.06■■■□□ 2.4
GABARAP-204ENST00000571253 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
GABARAP-204ENST00000571253 CUL7Q14999 1698 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms