Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 RARRES2P9-201ENST00000565168 469 ntBASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 LINC00628-201ENST00000628516 1289 ntBASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AP3S2-216ENST00000617003 1561 ntBASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PARPBPQ9NWS1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 REXO1L8P-201ENST00000604378 1897 ntBASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.46□□□□□ -0.1
PARPBPQ9NWS1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AL136379.1-201ENST00000623471 2642 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 KRT18P28-201ENST00000453838 1332 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 HYMAI-201ENST00000635591 3347 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AL353705.2-201ENST00000428243 662 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AC027612.4-201ENST00000605371 583 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AC026979.3-201ENST00000607315 403 ntBASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PARPBPQ9NWS1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PARPBPQ9NWS1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms