RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
HDAC8-206ENST00000373571 CCDC180Q9P1Z9 1646 aa30.18■■■□□ 2.42
HDAC8-206ENST00000373571 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
HDAC8-206ENST00000373571 SHROOM4Q9ULL8 1493 aa29.79■■■□□ 2.36
HDAC8-206ENST00000373571 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
HDAC8-206ENST00000373571 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
HDAC8-206ENST00000373571 DCAF1Q9Y4B6 1507 aa29.02■■■□□ 2.24
HDAC8-206ENST00000373571 CHIC1Q5VXU3 224 aa28.28■■■□□ 2.12
HDAC8-206ENST00000373571 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
HDAC8-206ENST00000373571 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
HDAC8-206ENST00000373571 ABCC9O60706 1549 aa28.13■■■□□ 2.09
HDAC8-206ENST00000373571 NACADO15069 1562 aa27.89■■■□□ 2.06
HDAC8-206ENST00000373571 RSF1Q96T23 1441 aaPredicted RBP27.8■■■□□ 2.04
HDAC8-206ENST00000373571 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
HDAC8-206ENST00000373571 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
HDAC8-206ENST00000373571 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
HDAC8-206ENST00000373571 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
HDAC8-206ENST00000373571 WIZO95785 1651 aa27.24■■□□□ 1.95
HDAC8-206ENST00000373571 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
HDAC8-206ENST00000373571 PCGF6Q9BYE7 350 aa27.19■■□□□ 1.94
HDAC8-206ENST00000373571 BAZ1AQ9NRL2 1556 aaPredicted RBP27.13■■□□□ 1.93
HDAC8-206ENST00000373571 HRCP23327 699 aa27.12■■□□□ 1.93
HDAC8-206ENST00000373571 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
HDAC8-206ENST00000373571 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
HDAC8-206ENST00000373571 FAM9AQ8IZU1 332 aaPredicted RBP26.89■■□□□ 1.89
HDAC8-206ENST00000373571 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
HDAC8-206ENST00000373571 EIF4G1Q04637 1599 aaKnown RBP26.86■■□□□ 1.89
HDAC8-206ENST00000373571 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
HDAC8-206ENST00000373571 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
HDAC8-206ENST00000373571 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
HDAC8-206ENST00000373571 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
HDAC8-206ENST00000373571 EHMT2Q96KQ7 1210 aa26.6■■□□□ 1.85
HDAC8-206ENST00000373571 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
HDAC8-206ENST00000373571 ABCC8Q09428 1581 aa26.54■■□□□ 1.84
HDAC8-206ENST00000373571 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
HDAC8-206ENST00000373571 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.83
HDAC8-206ENST00000373571 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
HDAC8-206ENST00000373571 SOGA1O94964 1423 aa26.22■■□□□ 1.79
HDAC8-206ENST00000373571 EEA1Q15075 1411 aa26.18■■□□□ 1.78
HDAC8-206ENST00000373571 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
HDAC8-206ENST00000373571 ZEB1P37275 1124 aaPredicted RBP26.16■■□□□ 1.78
HDAC8-206ENST00000373571 WRNQ14191 1432 aaPredicted RBP eCLIP26.14■■□□□ 1.77
HDAC8-206ENST00000373571 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
HDAC8-206ENST00000373571 CSRNP3Q8WYN3 585 aa26.07■■□□□ 1.76
HDAC8-206ENST00000373571 CEP162Q5TB80 1403 aa26.06■■□□□ 1.76
HDAC8-206ENST00000373571 TNIKQ9UKE5 1360 aa26.05■■□□□ 1.76
HDAC8-206ENST00000373571 SYNJ1O43426 1573 aa26.03■■□□□ 1.76
HDAC8-206ENST00000373571 GOLGA3Q08378 1498 aa25.96■■□□□ 1.75
HDAC8-206ENST00000373571 UBTFP17480 764 aaKnown RBP25.92■■□□□ 1.74
HDAC8-206ENST00000373571 KIF21BO75037 1637 aa25.84■■□□□ 1.73
HDAC8-206ENST00000373571 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
HDAC8-206ENST00000373571 HMGXB3Q12766 1538 aa25.8■■□□□ 1.72
HDAC8-206ENST00000373571 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
HDAC8-206ENST00000373571 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
HDAC8-206ENST00000373571 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
HDAC8-206ENST00000373571 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.71
HDAC8-206ENST00000373571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.69■■□□□ 1.7
HDAC8-206ENST00000373571 CCER1Q8TC90 406 aaPredicted RBP25.64■■□□□ 1.69
HDAC8-206ENST00000373571 RAPGEF2Q9Y4G8 1499 aa25.62■■□□□ 1.69
HDAC8-206ENST00000373571 CLIP1P30622 1438 aa25.62■■□□□ 1.69
HDAC8-206ENST00000373571 CFTRP13569 1480 aa25.52■■□□□ 1.68
HDAC8-206ENST00000373571 CUX1P39880 1505 aa25.51■■□□□ 1.67
HDAC8-206ENST00000373571 VPS8Q8N3P4 1428 aa25.51■■□□□ 1.67
HDAC8-206ENST00000373571 ERICH3Q5RHP9 1530 aa25.46■■□□□ 1.67
HDAC8-206ENST00000373571 PRXQ9BXM0 1461 aa25.43■■□□□ 1.66
HDAC8-206ENST00000373571 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
HDAC8-206ENST00000373571 RANGAP1P46060 587 aaPredicted RBP25.37■■□□□ 1.65
HDAC8-206ENST00000373571 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
HDAC8-206ENST00000373571 APLP2Q06481 763 aa25.34■■□□□ 1.65
HDAC8-206ENST00000373571 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
HDAC8-206ENST00000373571 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
HDAC8-206ENST00000373571 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
HDAC8-206ENST00000373571 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
HDAC8-206ENST00000373571 CUX2O14529 1486 aa25.13■■□□□ 1.61
HDAC8-206ENST00000373571 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
HDAC8-206ENST00000373571 IGF1RP08069 1367 aa25.06■■□□□ 1.6
HDAC8-206ENST00000373571 ARHGAP35Q9NRY4 1499 aa25.05■■□□□ 1.6
HDAC8-206ENST00000373571 DIEXFQ68CQ4 756 aaKnown RBP25.04■■□□□ 1.6
HDAC8-206ENST00000373571 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
HDAC8-206ENST00000373571 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
HDAC8-206ENST00000373571 CARMIL1Q5VZK9 1371 aa24.96■■□□□ 1.59
HDAC8-206ENST00000373571 ZNF316A6NFI3 1004 aaPredicted RBP24.93■■□□□ 1.58
HDAC8-206ENST00000373571 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
HDAC8-206ENST00000373571 RRBP1Q9P2E9 1410 aaKnown RBP24.89■■□□□ 1.58
HDAC8-206ENST00000373571 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
HDAC8-206ENST00000373571 NESP48681 1621 aa24.83■■□□□ 1.57
HDAC8-206ENST00000373571 SCAF1Q9H7N4 1312 aaKnown RBP24.82■■□□□ 1.56
HDAC8-206ENST00000373571 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
HDAC8-206ENST00000373571 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
HDAC8-206ENST00000373571 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
HDAC8-206ENST00000373571 TIAM1Q13009 1591 aa24.79■■□□□ 1.56
HDAC8-206ENST00000373571 MAP3K1Q13233 1512 aa24.78■■□□□ 1.56
HDAC8-206ENST00000373571 CCNB3Q8WWL7 1395 aa24.77■■□□□ 1.56
HDAC8-206ENST00000373571 DHX57Q6P158 1386 aaKnown RBP24.77■■□□□ 1.56
HDAC8-206ENST00000373571 CLSPNQ9HAW4 1339 aa24.76■■□□□ 1.55
HDAC8-206ENST00000373571 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
HDAC8-206ENST00000373571 ACIN1Q9UKV3 1341 aaKnown RBP24.71■■□□□ 1.55
HDAC8-206ENST00000373571 CUL7Q14999 1698 aa24.71■■□□□ 1.55
HDAC8-206ENST00000373571 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
HDAC8-206ENST00000373571 LRRC9Q6ZRR7 1453 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms