RNA–Protein interactions for RNA: ENST00000368563.6

TUBGCP2-203, Transcript of tubulin gamma complex associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-203ENST00000368563 NISCHQ9Y2I1 1504 aa29.26■■■□□ 2.28
TUBGCP2-203ENST00000368563 DCAF8L2P0C7V8 631 aa28.81■■■□□ 2.2
TUBGCP2-203ENST00000368563 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
TUBGCP2-203ENST00000368563 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
TUBGCP2-203ENST00000368563 EHMT2Q96KQ7 1210 aa26.18■■□□□ 1.78
TUBGCP2-203ENST00000368563 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
TUBGCP2-203ENST00000368563 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
TUBGCP2-203ENST00000368563 ABCC9O60706 1549 aa25.14■■□□□ 1.62
TUBGCP2-203ENST00000368563 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.61
TUBGCP2-203ENST00000368563 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
TUBGCP2-203ENST00000368563 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
TUBGCP2-203ENST00000368563 APLP2Q06481 763 aa24.87■■□□□ 1.57
TUBGCP2-203ENST00000368563 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.566e-7■■■■□ 22.8
TUBGCP2-203ENST00000368563 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
TUBGCP2-203ENST00000368563 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
TUBGCP2-203ENST00000368563 LOC105371045A0A1W2PR82 267 aa24.64■■□□□ 1.53
TUBGCP2-203ENST00000368563 PPARGC1BQ86YN6 1023 aaKnown RBP24.61■■□□□ 1.53
TUBGCP2-203ENST00000368563 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
TUBGCP2-203ENST00000368563 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
TUBGCP2-203ENST00000368563 CCER1Q8TC90 406 aaPredicted RBP24.19■■□□□ 1.46
TUBGCP2-203ENST00000368563 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
TUBGCP2-203ENST00000368563 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
TUBGCP2-203ENST00000368563 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
TUBGCP2-203ENST00000368563 ITGAEP38570 1179 aa23.87■■□□□ 1.41
TUBGCP2-203ENST00000368563 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
TUBGCP2-203ENST00000368563 HNRNPUL2Q1KMD3 747 aaKnown RBP23.76■■□□□ 1.39
TUBGCP2-203ENST00000368563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
TUBGCP2-203ENST00000368563 HRCP23327 699 aa23.59■■□□□ 1.37
TUBGCP2-203ENST00000368563 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
TUBGCP2-203ENST00000368563 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.34
TUBGCP2-203ENST00000368563 RB1CC1Q8TDY2 1594 aa23.37■■□□□ 1.33
TUBGCP2-203ENST00000368563 FBLN2P98095 1184 aa23.36■■□□□ 1.33
TUBGCP2-203ENST00000368563 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
TUBGCP2-203ENST00000368563 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
TUBGCP2-203ENST00000368563 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
TUBGCP2-203ENST00000368563 FAM50AQ14320 339 aaKnown RBP23.27■■□□□ 1.32
TUBGCP2-203ENST00000368563 NACADO15069 1562 aa23.26■■□□□ 1.31
TUBGCP2-203ENST00000368563 ARID3CA6NKF2 412 aa23.22■■□□□ 1.31
TUBGCP2-203ENST00000368563 CECR2Q9BXF3 1484 aa23.21■■□□□ 1.31
TUBGCP2-203ENST00000368563 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
TUBGCP2-203ENST00000368563 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
TUBGCP2-203ENST00000368563 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.29
TUBGCP2-203ENST00000368563 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
TUBGCP2-203ENST00000368563 POLR3GLQ9BT43 218 aa23.06■■□□□ 1.28
TUBGCP2-203ENST00000368563 CNGB1Q14028 1251 aaPredicted RBP23.04■■□□□ 1.28
TUBGCP2-203ENST00000368563 NEUROD1Q13562 356 aa22.96■■□□□ 1.27
TUBGCP2-203ENST00000368563 TRIM52Q96A61 297 aa22.93■■□□□ 1.26
TUBGCP2-203ENST00000368563 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
TUBGCP2-203ENST00000368563 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
TUBGCP2-203ENST00000368563 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
TUBGCP2-203ENST00000368563 DIEXFQ68CQ4 756 aaKnown RBP22.81■■□□□ 1.24
TUBGCP2-203ENST00000368563 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
TUBGCP2-203ENST00000368563 ZNF777Q9ULD5 760 aaPredicted RBP22.73■■□□□ 1.23
TUBGCP2-203ENST00000368563 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
TUBGCP2-203ENST00000368563 NEFLP07196 543 aa22.65■■□□□ 1.22
TUBGCP2-203ENST00000368563 CLIP1P30622 1438 aa22.61■■□□□ 1.21
TUBGCP2-203ENST00000368563 CCDC88BA6NC98 1476 aa22.54■■□□□ 1.2
TUBGCP2-203ENST00000368563 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
TUBGCP2-203ENST00000368563 CEP162Q5TB80 1403 aa22.53■■□□□ 1.2
TUBGCP2-203ENST00000368563 SOGA1O94964 1423 aa22.53■■□□□ 1.2
TUBGCP2-203ENST00000368563 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
TUBGCP2-203ENST00000368563 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
TUBGCP2-203ENST00000368563 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
TUBGCP2-203ENST00000368563 WIZO95785 1651 aa22.47■■□□□ 1.19
TUBGCP2-203ENST00000368563 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
TUBGCP2-203ENST00000368563 ZNF316A6NFI3 1004 aaPredicted RBP22.45■■□□□ 1.18
TUBGCP2-203ENST00000368563 GOLGA3Q08378 1498 aa22.44■■□□□ 1.18
TUBGCP2-203ENST00000368563 EEA1Q15075 1411 aa22.44■■□□□ 1.18
TUBGCP2-203ENST00000368563 KIF27Q86VH2 1401 aa22.41■■□□□ 1.18
TUBGCP2-203ENST00000368563 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
TUBGCP2-203ENST00000368563 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
TUBGCP2-203ENST00000368563 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
TUBGCP2-203ENST00000368563 CUX2O14529 1486 aa22.25■■□□□ 1.15
TUBGCP2-203ENST00000368563 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
TUBGCP2-203ENST00000368563 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
TUBGCP2-203ENST00000368563 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
TUBGCP2-203ENST00000368563 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
TUBGCP2-203ENST00000368563 ANP32CO43423 234 aa22.2■■□□□ 1.14
TUBGCP2-203ENST00000368563 ERCC6Q03468 1493 aa22.19■■□□□ 1.14
TUBGCP2-203ENST00000368563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.19■■□□□ 1.142e-9■□□□□ 9.6
TUBGCP2-203ENST00000368563 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
TUBGCP2-203ENST00000368563 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
TUBGCP2-203ENST00000368563 NPM1P06748 294 aaKnown RBP eCLIP22.18■■□□□ 1.14
TUBGCP2-203ENST00000368563 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
TUBGCP2-203ENST00000368563 TONSLQ96HA7 1378 aa22.15■■□□□ 1.14
TUBGCP2-203ENST00000368563 HIRIP3Q9BW71 556 aaPredicted RBP22.15■■□□□ 1.14
TUBGCP2-203ENST00000368563 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
TUBGCP2-203ENST00000368563 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
TUBGCP2-203ENST00000368563 TSPY4P0CV99 314 aa22.12■■□□□ 1.13
TUBGCP2-203ENST00000368563 TSPY10P0CW01 314 aa22.12■■□□□ 1.13
TUBGCP2-203ENST00000368563 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
TUBGCP2-203ENST00000368563 GTF3C3Q9Y5Q9 886 aa22.08■■□□□ 1.13
TUBGCP2-203ENST00000368563 CHGAP10645 457 aaKnown RBP22.08■■□□□ 1.12
TUBGCP2-203ENST00000368563 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
TUBGCP2-203ENST00000368563 BCANQ96GW7 911 aa22.06■■□□□ 1.12
TUBGCP2-203ENST00000368563 CADPSQ9ULU8 1353 aa22.06■■□□□ 1.12
TUBGCP2-203ENST00000368563 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
TUBGCP2-203ENST00000368563 KANK4Q5T7N3 995 aaPredicted RBP22.02■■□□□ 1.12
TUBGCP2-203ENST00000368563 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
TUBGCP2-203ENST00000368563 KDM2AQ9Y2K7 1162 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms