Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6CP51160 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.46■□□□□ 0.38
PDE6CP51160 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.46■□□□□ 0.38
PDE6CP51160 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6CP51160 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.46■□□□□ 0.38
PDE6CP51160 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6CP51160 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDE6CP51160 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6CP51160 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
PDE6CP51160 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 CNN2P2-201ENST00000443536 909 ntBASIC17.45■□□□□ 0.38
PDE6CP51160 CNN2P3-201ENST00000450201 906 ntBASIC17.45■□□□□ 0.38
PDE6CP51160 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.45■□□□□ 0.38
PDE6CP51160 AC069335.1-201ENST00000489972 472 ntBASIC17.45■□□□□ 0.38
PDE6CP51160 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.45■□□□□ 0.38
PDE6CP51160 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 AL136317.3-201ENST00000618497 906 ntBASIC17.45■□□□□ 0.38
PDE6CP51160 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PDE6CP51160 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PDE6CP51160 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDE6CP51160 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDE6CP51160 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6CP51160 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 CDC14C-201ENST00000428251 1719 ntBASIC17.44■□□□□ 0.38
PDE6CP51160 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 LINC02447-202ENST00000501888 2146 ntBASIC17.44■□□□□ 0.38
PDE6CP51160 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6CP51160 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6CP51160 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6CP51160 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6CP51160 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.44■□□□□ 0.38
PDE6CP51160 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 TSPY26P-202ENST00000565928 3884 ntBASIC17.44■□□□□ 0.38
PDE6CP51160 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6CP51160 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6CP51160 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.44■□□□□ 0.38
PDE6CP51160 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PDE6CP51160 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6CP51160 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDE6CP51160 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDE6CP51160 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms