RNA–Protein interactions for RNA: ENST00000406477.7

PARVB-204, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-204ENST00000406477 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
PARVB-204ENST00000406477 CCDC180Q9P1Z9 1646 aa31.19■■■□□ 2.58
PARVB-204ENST00000406477 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
PARVB-204ENST00000406477 DCAF1Q9Y4B6 1507 aa29.76■■■□□ 2.35
PARVB-204ENST00000406477 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
PARVB-204ENST00000406477 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
PARVB-204ENST00000406477 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
PARVB-204ENST00000406477 ABCC9O60706 1549 aa29.16■■■□□ 2.26
PARVB-204ENST00000406477 NACADO15069 1562 aa29.02■■■□□ 2.24
PARVB-204ENST00000406477 RB1CC1Q8TDY2 1594 aa28.68■■■□□ 2.18
PARVB-204ENST00000406477 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
PARVB-204ENST00000406477 SUPT5HO00267 1087 aaKnown RBP28.5■■■□□ 2.15
PARVB-204ENST00000406477 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
PARVB-204ENST00000406477 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
PARVB-204ENST00000406477 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
PARVB-204ENST00000406477 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
PARVB-204ENST00000406477 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
PARVB-204ENST00000406477 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.02
PARVB-204ENST00000406477 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
PARVB-204ENST00000406477 SMARCA4P51532 1647 aa27.52■■■□□ 2
PARVB-204ENST00000406477 WIZO95785 1651 aa27.47■■□□□ 1.99
PARVB-204ENST00000406477 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
PARVB-204ENST00000406477 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
PARVB-204ENST00000406477 PEG3Q9GZU2 1588 aa27.21■■□□□ 1.95
PARVB-204ENST00000406477 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
PARVB-204ENST00000406477 ATAD2BQ9ULI0 1458 aa27.02■■□□□ 1.92
PARVB-204ENST00000406477 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
PARVB-204ENST00000406477 BAZ1BQ9UIG0 1483 aaKnown RBP26.9■■□□□ 1.9
PARVB-204ENST00000406477 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
PARVB-204ENST00000406477 TRIM41Q8WV44 630 aa26.85■■□□□ 1.89
PARVB-204ENST00000406477 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
PARVB-204ENST00000406477 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
PARVB-204ENST00000406477 ABCC8Q09428 1581 aa26.44■■□□□ 1.82
PARVB-204ENST00000406477 CC2D2AQ9P2K1 1620 aa26.4■■□□□ 1.82
PARVB-204ENST00000406477 LOC105371045A0A1W2PR82 267 aa26.36■■□□□ 1.81
PARVB-204ENST00000406477 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
PARVB-204ENST00000406477 FAM9AQ8IZU1 332 aaPredicted RBP26.27■■□□□ 1.8
PARVB-204ENST00000406477 CFTRP13569 1480 aa26.23■■□□□ 1.79
PARVB-204ENST00000406477 EEA1Q15075 1411 aa26.22■■□□□ 1.79
PARVB-204ENST00000406477 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
PARVB-204ENST00000406477 CADPSQ9ULU8 1353 aa26.11■■□□□ 1.77
PARVB-204ENST00000406477 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
PARVB-204ENST00000406477 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
PARVB-204ENST00000406477 SOGA1O94964 1423 aa26.03■■□□□ 1.76
PARVB-204ENST00000406477 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
PARVB-204ENST00000406477 CSRNP3Q8WYN3 585 aa25.99■■□□□ 1.75
PARVB-204ENST00000406477 CUX1P39880 1505 aa25.89■■□□□ 1.73
PARVB-204ENST00000406477 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
PARVB-204ENST00000406477 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
PARVB-204ENST00000406477 LAMC3Q9Y6N6 1575 aa25.81■■□□□ 1.72
PARVB-204ENST00000406477 GOLGA3Q08378 1498 aa25.8■■□□□ 1.72
PARVB-204ENST00000406477 TNIKQ9UKE5 1360 aa25.79■■□□□ 1.72
PARVB-204ENST00000406477 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PARVB-204ENST00000406477 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
PARVB-204ENST00000406477 KIF21BO75037 1637 aa25.77■■□□□ 1.72
PARVB-204ENST00000406477 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
PARVB-204ENST00000406477 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
PARVB-204ENST00000406477 NESP48681 1621 aa25.65■■□□□ 1.7
PARVB-204ENST00000406477 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PARVB-204ENST00000406477 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
PARVB-204ENST00000406477 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
PARVB-204ENST00000406477 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
PARVB-204ENST00000406477 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
PARVB-204ENST00000406477 ERICH3Q5RHP9 1530 aa25.56■■□□□ 1.68
PARVB-204ENST00000406477 PRXQ9BXM0 1461 aa25.54■■□□□ 1.68
PARVB-204ENST00000406477 TRIM26Q12899 539 aaPredicted RBP25.54■■□□□ 1.68
PARVB-204ENST00000406477 TOPBP1Q92547 1522 aa25.54■■□□□ 1.68
PARVB-204ENST00000406477 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
PARVB-204ENST00000406477 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
PARVB-204ENST00000406477 CUX2O14529 1486 aa25.5■■□□□ 1.67
PARVB-204ENST00000406477 POLA1P09884 1462 aaPredicted RBP25.42■■□□□ 1.66
PARVB-204ENST00000406477 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
PARVB-204ENST00000406477 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
PARVB-204ENST00000406477 IGF1RP08069 1367 aa25.38■■□□□ 1.65
PARVB-204ENST00000406477 CLIP1P30622 1438 aa25.37■■□□□ 1.65
PARVB-204ENST00000406477 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
PARVB-204ENST00000406477 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
PARVB-204ENST00000406477 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
PARVB-204ENST00000406477 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
PARVB-204ENST00000406477 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
PARVB-204ENST00000406477 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
PARVB-204ENST00000406477 CUL7Q14999 1698 aa25.18■■□□□ 1.62
PARVB-204ENST00000406477 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
PARVB-204ENST00000406477 GAPVD1Q14C86 1478 aa25.1■■□□□ 1.61
PARVB-204ENST00000406477 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
PARVB-204ENST00000406477 WDR62O43379 1518 aa25.08■■□□□ 1.61
PARVB-204ENST00000406477 HRCP23327 699 aa25.07■■□□□ 1.6
PARVB-204ENST00000406477 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
PARVB-204ENST00000406477 APLP2Q06481 763 aa25.05■■□□□ 1.6
PARVB-204ENST00000406477 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
PARVB-204ENST00000406477 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
PARVB-204ENST00000406477 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
PARVB-204ENST00000406477 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
PARVB-204ENST00000406477 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
PARVB-204ENST00000406477 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
PARVB-204ENST00000406477 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.57
PARVB-204ENST00000406477 CTTNBP2Q8WZ74 1663 aa24.89■■□□□ 1.57
PARVB-204ENST00000406477 GRIN2BQ13224 1484 aa24.88■■□□□ 1.57
PARVB-204ENST00000406477 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
PARVB-204ENST00000406477 EFCAB5A4FU69 1503 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms