RNA–Protein interactions for RNA: ENST00000264031.2

UPK2-201, Transcript of uroplakin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK2, Length 916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-201ENST00000264031 NISCHQ9Y2I1 1504 aa41.63■■■■■ 4.25
UPK2-201ENST00000264031 CCDC180Q9P1Z9 1646 aa37.44■■■■□ 3.58
UPK2-201ENST00000264031 ABCC9O60706 1549 aa37.36■■■■□ 3.57
UPK2-201ENST00000264031 RB1CC1Q8TDY2 1594 aa35.54■■■■□ 3.28
UPK2-201ENST00000264031 NACADO15069 1562 aa35.28■■■■□ 3.24
UPK2-201ENST00000264031 DNAJC5BQ9UF47 199 aa35.06■■■■□ 3.2
UPK2-201ENST00000264031 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
UPK2-201ENST00000264031 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
UPK2-201ENST00000264031 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.16
UPK2-201ENST00000264031 PABPN1Q86U42 306 aaKnown RBP eCLIP34.71■■■■□ 3.15
UPK2-201ENST00000264031 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
UPK2-201ENST00000264031 ZCCHC6Q5VYS8 1495 aaKnown RBP34.53■■■■□ 3.12
UPK2-201ENST00000264031 DCAF1Q9Y4B6 1507 aa34.35■■■■□ 3.09
UPK2-201ENST00000264031 SCRIBQ14160 1630 aa34.13■■■■□ 3.05
UPK2-201ENST00000264031 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
UPK2-201ENST00000264031 CC2D2AQ9P2K1 1620 aa33.82■■■■□ 3
UPK2-201ENST00000264031 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
UPK2-201ENST00000264031 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
UPK2-201ENST00000264031 SMARCA4P51532 1647 aa32.55■■■□□ 2.8
UPK2-201ENST00000264031 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
UPK2-201ENST00000264031 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
UPK2-201ENST00000264031 SMARCA2P51531 1590 aa32.37■■■□□ 2.77
UPK2-201ENST00000264031 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
UPK2-201ENST00000264031 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
UPK2-201ENST00000264031 PEG3Q9GZU2 1588 aa32.2■■■□□ 2.75
UPK2-201ENST00000264031 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
UPK2-201ENST00000264031 NESP48681 1621 aa32.16■■■□□ 2.74
UPK2-201ENST00000264031 BAZ1BQ9UIG0 1483 aaKnown RBP32.14■■■□□ 2.74
UPK2-201ENST00000264031 CUX2O14529 1486 aa32.13■■■□□ 2.73
UPK2-201ENST00000264031 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
UPK2-201ENST00000264031 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
UPK2-201ENST00000264031 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
UPK2-201ENST00000264031 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
UPK2-201ENST00000264031 LAMC3Q9Y6N6 1575 aa31.86■■■□□ 2.69
UPK2-201ENST00000264031 WIZO95785 1651 aa31.81■■■□□ 2.68
UPK2-201ENST00000264031 PDS5BQ9NTI5 1447 aa31.55■■■□□ 2.64
UPK2-201ENST00000264031 CADPSQ9ULU8 1353 aa31.51■■■□□ 2.63
UPK2-201ENST00000264031 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
UPK2-201ENST00000264031 MRC2Q9UBG0 1479 aa31.38■■■□□ 2.61
UPK2-201ENST00000264031 WDR62O43379 1518 aa31.37■■■□□ 2.61
UPK2-201ENST00000264031 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
UPK2-201ENST00000264031 CEP164Q9UPV0 1460 aa31.25■■■□□ 2.59
UPK2-201ENST00000264031 CFTRP13569 1480 aa31.21■■■□□ 2.59
UPK2-201ENST00000264031 FANCD2Q9BXW9 1451 aa31.21■■■□□ 2.59
UPK2-201ENST00000264031 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
UPK2-201ENST00000264031 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
UPK2-201ENST00000264031 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
UPK2-201ENST00000264031 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
UPK2-201ENST00000264031 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
UPK2-201ENST00000264031 ZNF608Q9ULD9 1512 aaPredicted RBP30.66■■■□□ 2.5
UPK2-201ENST00000264031 IFT140Q96RY7 1462 aa30.58■■■□□ 2.49
UPK2-201ENST00000264031 DNMBPQ6XZF7 1577 aa30.57■■■□□ 2.48
UPK2-201ENST00000264031 EIF4G3O43432 1585 aaKnown RBP30.54■■■□□ 2.48
UPK2-201ENST00000264031 OSCARQ8IYS5 282 aa30.52■■■□□ 2.48
UPK2-201ENST00000264031 TARBP1Q13395 1621 aaKnown RBP30.49■■■□□ 2.47
UPK2-201ENST00000264031 ABCC8Q09428 1581 aa30.45■■■□□ 2.47
UPK2-201ENST00000264031 RIMBP3CA6NJZ7 1639 aa30.42■■■□□ 2.46
UPK2-201ENST00000264031 RIMBP3BA6NNM3 1639 aa30.42■■■□□ 2.46
UPK2-201ENST00000264031 RIMBP3Q9UFD9 1639 aa30.42■■■□□ 2.46
UPK2-201ENST00000264031 CHD1O14646 1710 aa30.4■■■□□ 2.46
UPK2-201ENST00000264031 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
UPK2-201ENST00000264031 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
UPK2-201ENST00000264031 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
UPK2-201ENST00000264031 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
UPK2-201ENST00000264031 CUX1P39880 1505 aa30.19■■■□□ 2.42
UPK2-201ENST00000264031 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
UPK2-201ENST00000264031 WDR97A6NE52 1622 aa30.13■■■□□ 2.41
UPK2-201ENST00000264031 SOGA1O94964 1423 aa30.11■■■□□ 2.41
UPK2-201ENST00000264031 TDRD9Q8NDG6 1382 aaKnown RBP30.08■■■□□ 2.41
UPK2-201ENST00000264031 SNAPC4Q5SXM2 1469 aa30.03■■■□□ 2.4
UPK2-201ENST00000264031 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
UPK2-201ENST00000264031 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
UPK2-201ENST00000264031 FBLN2P98095 1184 aa29.97■■■□□ 2.39
UPK2-201ENST00000264031 CLASP1Q7Z460 1538 aa29.95■■■□□ 2.38
UPK2-201ENST00000264031 MAGI1Q96QZ7 1491 aaPredicted RBP29.89■■■□□ 2.38
UPK2-201ENST00000264031 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
UPK2-201ENST00000264031 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
UPK2-201ENST00000264031 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
UPK2-201ENST00000264031 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
UPK2-201ENST00000264031 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
UPK2-201ENST00000264031 ABCA10Q8WWZ4 1543 aa29.8■■■□□ 2.36
UPK2-201ENST00000264031 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
UPK2-201ENST00000264031 GAPVD1Q14C86 1478 aa29.79■■■□□ 2.36
UPK2-201ENST00000264031 BIVM-ERCC5R4GMW8 1640 aa29.75■■■□□ 2.35
UPK2-201ENST00000264031 CHMP7Q8WUX9 453 aaPredicted RBP29.72■■■□□ 2.35
UPK2-201ENST00000264031 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
UPK2-201ENST00000264031 ADAMTS12P58397 1594 aa29.63■■■□□ 2.33
UPK2-201ENST00000264031 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
UPK2-201ENST00000264031 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
UPK2-201ENST00000264031 CEP170Q5SW79 1584 aa29.55■■■□□ 2.32
UPK2-201ENST00000264031 ERCC6L2Q5T890 1561 aa29.54■■■□□ 2.32
UPK2-201ENST00000264031 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
UPK2-201ENST00000264031 NUP160Q12769 1436 aa29.45■■■□□ 2.3
UPK2-201ENST00000264031 SHROOM2Q13796 1616 aa29.43■■■□□ 2.3
UPK2-201ENST00000264031 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
UPK2-201ENST00000264031 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
UPK2-201ENST00000264031 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
UPK2-201ENST00000264031 KIF13AQ9H1H9 1805 aa29.13■■■□□ 2.25
UPK2-201ENST00000264031 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
UPK2-201ENST00000264031 CUL7Q14999 1698 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 1668.7 ms