RNA–Protein interactions for RNA: ENST00000371015.5

PHACTR3-204, Transcript of phosphatase and actin regulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHACTR3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-204ENST00000371015 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
PHACTR3-204ENST00000371015 PELP1Q8IZL8 1130 aaKnown RBP28.21■■■□□ 2.11
PHACTR3-204ENST00000371015 MYT1Q01538 1121 aa27.64■■■□□ 2.02
PHACTR3-204ENST00000371015 HRCP23327 699 aa27.12■■□□□ 1.93
PHACTR3-204ENST00000371015 CCDC180Q9P1Z9 1646 aa27.02■■□□□ 1.92
PHACTR3-204ENST00000371015 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
PHACTR3-204ENST00000371015 SCAF1Q9H7N4 1312 aaKnown RBP25.99■■□□□ 1.75
PHACTR3-204ENST00000371015 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.75
PHACTR3-204ENST00000371015 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
PHACTR3-204ENST00000371015 ABCC9O60706 1549 aa25.58■■□□□ 1.69
PHACTR3-204ENST00000371015 ZEB1P37275 1124 aaPredicted RBP25.47■■□□□ 1.67
PHACTR3-204ENST00000371015 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
PHACTR3-204ENST00000371015 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
PHACTR3-204ENST00000371015 NACADO15069 1562 aa25.27■■□□□ 1.64
PHACTR3-204ENST00000371015 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
PHACTR3-204ENST00000371015 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PHACTR3-204ENST00000371015 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
PHACTR3-204ENST00000371015 CENPBP07199 599 aaPredicted RBP25.08■■□□□ 1.61
PHACTR3-204ENST00000371015 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
PHACTR3-204ENST00000371015 BCL11AQ9H165 835 aa24.97■■□□□ 1.59
PHACTR3-204ENST00000371015 GTF3C3Q9Y5Q9 886 aa24.93■■□□□ 1.58
PHACTR3-204ENST00000371015 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
PHACTR3-204ENST00000371015 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
PHACTR3-204ENST00000371015 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.56
PHACTR3-204ENST00000371015 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
PHACTR3-204ENST00000371015 ERICH6Q7L0X2 663 aa24.77■■□□□ 1.56
PHACTR3-204ENST00000371015 PRKCSHP14314 528 aaPredicted RBP24.75■■□□□ 1.55
PHACTR3-204ENST00000371015 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
PHACTR3-204ENST00000371015 UNC13AQ9UPW8 1703 aa24.5■■□□□ 1.51
PHACTR3-204ENST00000371015 ANP32EQ9BTT0 268 aa24.46■■□□□ 1.51
PHACTR3-204ENST00000371015 APLP2Q06481 763 aa24.37■■□□□ 1.49
PHACTR3-204ENST00000371015 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
PHACTR3-204ENST00000371015 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
PHACTR3-204ENST00000371015 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
PHACTR3-204ENST00000371015 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.44
PHACTR3-204ENST00000371015 LOC105371045A0A1W2PR82 267 aa23.99■■□□□ 1.43
PHACTR3-204ENST00000371015 CSRNP3Q8WYN3 585 aa23.97■■□□□ 1.43
PHACTR3-204ENST00000371015 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
PHACTR3-204ENST00000371015 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
PHACTR3-204ENST00000371015 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
PHACTR3-204ENST00000371015 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
PHACTR3-204ENST00000371015 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
PHACTR3-204ENST00000371015 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
PHACTR3-204ENST00000371015 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
PHACTR3-204ENST00000371015 SUPT16HQ9Y5B9 1047 aaKnown RBP23.57■■□□□ 1.36
PHACTR3-204ENST00000371015 YTHDC1Q96MU7 727 aaKnown RBP23.55■■□□□ 1.36
PHACTR3-204ENST00000371015 MYT1LQ9UL68 1186 aa23.55■■□□□ 1.36
PHACTR3-204ENST00000371015 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
PHACTR3-204ENST00000371015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.44■■□□□ 1.34
PHACTR3-204ENST00000371015 MIER1Q8N108 512 aa23.35■■□□□ 1.33
PHACTR3-204ENST00000371015 RSF1Q96T23 1441 aaPredicted RBP23.31■■□□□ 1.32
PHACTR3-204ENST00000371015 ERICH6BQ5W0A0 696 aa23.25■■□□□ 1.31
PHACTR3-204ENST00000371015 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
PHACTR3-204ENST00000371015 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
PHACTR3-204ENST00000371015 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
PHACTR3-204ENST00000371015 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
PHACTR3-204ENST00000371015 UBE2Q2Q8WVN8 375 aa23.22■■□□□ 1.31
PHACTR3-204ENST00000371015 SMARCA2P51531 1590 aa23.21■■□□□ 1.31
PHACTR3-204ENST00000371015 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
PHACTR3-204ENST00000371015 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
PHACTR3-204ENST00000371015 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
PHACTR3-204ENST00000371015 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
PHACTR3-204ENST00000371015 RBM19Q9Y4C8 960 aaKnown RBP23.11■■□□□ 1.29
PHACTR3-204ENST00000371015 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
PHACTR3-204ENST00000371015 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
PHACTR3-204ENST00000371015 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
PHACTR3-204ENST00000371015 DEKP35659 375 aaKnown RBP22.91■■□□□ 1.26
PHACTR3-204ENST00000371015 MSH5O43196 834 aa22.87■■□□□ 1.25
PHACTR3-204ENST00000371015 EIF5BO60841 1220 aaKnown RBP22.86■■□□□ 1.25
PHACTR3-204ENST00000371015 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
PHACTR3-204ENST00000371015 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
PHACTR3-204ENST00000371015 MROH2BQ7Z745 1585 aa22.75■■□□□ 1.23
PHACTR3-204ENST00000371015 DAXXQ9UER7 740 aaPredicted RBP22.71■■□□□ 1.23
PHACTR3-204ENST00000371015 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
PHACTR3-204ENST00000371015 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
PHACTR3-204ENST00000371015 NEFLP07196 543 aa22.67■■□□□ 1.22
PHACTR3-204ENST00000371015 WIZO95785 1651 aa22.65■■□□□ 1.22
PHACTR3-204ENST00000371015 FKBP8Q14318 412 aa22.65■■□□□ 1.22
PHACTR3-204ENST00000371015 EHMT2Q96KQ7 1210 aa22.61■■□□□ 1.21
PHACTR3-204ENST00000371015 BCANQ96GW7 911 aa22.57■■□□□ 1.2
PHACTR3-204ENST00000371015 TOP2AP11388 1531 aaKnown RBP22.55■■□□□ 1.2
PHACTR3-204ENST00000371015 CUX2O14529 1486 aa22.52■■□□□ 1.19
PHACTR3-204ENST00000371015 PKNOX2Q96KN3 472 aa22.51■■□□□ 1.19
PHACTR3-204ENST00000371015 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
PHACTR3-204ENST00000371015 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
PHACTR3-204ENST00000371015 CDK11AQ9UQ88 783 aaPredicted RBP22.48■■□□□ 1.19
PHACTR3-204ENST00000371015 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
PHACTR3-204ENST00000371015 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
PHACTR3-204ENST00000371015 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
PHACTR3-204ENST00000371015 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
PHACTR3-204ENST00000371015 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
PHACTR3-204ENST00000371015 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
PHACTR3-204ENST00000371015 CEP162Q5TB80 1403 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ITGAEP38570 1179 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 THOC2Q8NI27 1593 aaKnown RBP22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 EEA1Q15075 1411 aa22.25■■□□□ 1.15
PHACTR3-204ENST00000371015 IL27Q8NEV9 243 aa22.24■■□□□ 1.15
PHACTR3-204ENST00000371015 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms