RNA–Protein interactions for RNA: ENST00000415822.6

MFSD1-203, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene MFSD1, Length 2,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-203ENST00000415822 NISCHQ9Y2I1 1504 aa33.79■■■■□ 3
MFSD1-203ENST00000415822 CCDC180Q9P1Z9 1646 aa29.08■■■□□ 2.25
MFSD1-203ENST00000415822 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
MFSD1-203ENST00000415822 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
MFSD1-203ENST00000415822 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
MFSD1-203ENST00000415822 DCAF1Q9Y4B6 1507 aa27.7■■■□□ 2.02
MFSD1-203ENST00000415822 ABCC9O60706 1549 aa27.61■■■□□ 2.01
MFSD1-203ENST00000415822 SUPT5HO00267 1087 aaKnown RBP27.48■■□□□ 1.99
MFSD1-203ENST00000415822 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
MFSD1-203ENST00000415822 MYO15BQ96JP2 1530 aa27.16■■□□□ 1.94
MFSD1-203ENST00000415822 HRCP23327 699 aa27.07■■□□□ 1.92
MFSD1-203ENST00000415822 NACADO15069 1562 aa27.05■■□□□ 1.92
MFSD1-203ENST00000415822 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
MFSD1-203ENST00000415822 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
MFSD1-203ENST00000415822 PCGF6Q9BYE7 350 aa26.72■■□□□ 1.87
MFSD1-203ENST00000415822 PPARGC1BQ86YN6 1023 aaKnown RBP26.47■■□□□ 1.83
MFSD1-203ENST00000415822 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
MFSD1-203ENST00000415822 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
MFSD1-203ENST00000415822 UNC13AQ9UPW8 1703 aa26.41■■□□□ 1.82
MFSD1-203ENST00000415822 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
MFSD1-203ENST00000415822 PABPN1Q86U42 306 aaKnown RBP eCLIP26.25■■□□□ 1.79
MFSD1-203ENST00000415822 LOC105371045A0A1W2PR82 267 aa26.23■■□□□ 1.79
MFSD1-203ENST00000415822 WIZO95785 1651 aa26.09■■□□□ 1.77
MFSD1-203ENST00000415822 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
MFSD1-203ENST00000415822 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
MFSD1-203ENST00000415822 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
MFSD1-203ENST00000415822 SMARCA4P51532 1647 aa25.9■■□□□ 1.74
MFSD1-203ENST00000415822 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
MFSD1-203ENST00000415822 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.69
MFSD1-203ENST00000415822 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
MFSD1-203ENST00000415822 CCDC88BA6NC98 1476 aa25.52■■□□□ 1.68
MFSD1-203ENST00000415822 SMARCA2P51531 1590 aa25.49■■□□□ 1.67
MFSD1-203ENST00000415822 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
MFSD1-203ENST00000415822 PEG3Q9GZU2 1588 aa25.41■■□□□ 1.66
MFSD1-203ENST00000415822 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
MFSD1-203ENST00000415822 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
MFSD1-203ENST00000415822 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
MFSD1-203ENST00000415822 SCAF1Q9H7N4 1312 aaKnown RBP25.32■■□□□ 1.64
MFSD1-203ENST00000415822 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
MFSD1-203ENST00000415822 ABCC8Q09428 1581 aa25.24■■□□□ 1.63
MFSD1-203ENST00000415822 EHMT2Q96KQ7 1210 aa25.23■■□□□ 1.63
MFSD1-203ENST00000415822 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
MFSD1-203ENST00000415822 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
MFSD1-203ENST00000415822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
MFSD1-203ENST00000415822 CCER1Q8TC90 406 aaPredicted RBP24.9■■□□□ 1.58
MFSD1-203ENST00000415822 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
MFSD1-203ENST00000415822 ACIN1Q9UKV3 1341 aaKnown RBP24.87■■□□□ 1.57
MFSD1-203ENST00000415822 CC2D2AQ9P2K1 1620 aa24.85■■□□□ 1.57
MFSD1-203ENST00000415822 SOGA1O94964 1423 aa24.84■■□□□ 1.57
MFSD1-203ENST00000415822 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
MFSD1-203ENST00000415822 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
MFSD1-203ENST00000415822 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
MFSD1-203ENST00000415822 DIEXFQ68CQ4 756 aaKnown RBP24.71■■□□□ 1.55
MFSD1-203ENST00000415822 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
MFSD1-203ENST00000415822 CFTRP13569 1480 aa24.62■■□□□ 1.53
MFSD1-203ENST00000415822 GTF3C3Q9Y5Q9 886 aa24.62■■□□□ 1.53
MFSD1-203ENST00000415822 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
MFSD1-203ENST00000415822 TTBK1Q5TCY1 1321 aaPredicted RBP24.55■■□□□ 1.52
MFSD1-203ENST00000415822 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
MFSD1-203ENST00000415822 EEA1Q15075 1411 aa24.52■■□□□ 1.52
MFSD1-203ENST00000415822 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
MFSD1-203ENST00000415822 CUX1P39880 1505 aa24.49■■□□□ 1.51
MFSD1-203ENST00000415822 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
MFSD1-203ENST00000415822 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
MFSD1-203ENST00000415822 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
MFSD1-203ENST00000415822 CEP162Q5TB80 1403 aa24.44■■□□□ 1.5
MFSD1-203ENST00000415822 PRDM2Q13029 1718 aa24.42■■□□□ 1.5
MFSD1-203ENST00000415822 NESP48681 1621 aa24.37■■□□□ 1.49
MFSD1-203ENST00000415822 ZNF316A6NFI3 1004 aaPredicted RBP24.36■■□□□ 1.49
MFSD1-203ENST00000415822 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
MFSD1-203ENST00000415822 GOLGA3Q08378 1498 aa24.36■■□□□ 1.49
MFSD1-203ENST00000415822 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
MFSD1-203ENST00000415822 MYT1Q01538 1121 aa24.28■■□□□ 1.48
MFSD1-203ENST00000415822 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
MFSD1-203ENST00000415822 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
MFSD1-203ENST00000415822 KIF21BO75037 1637 aa24.26■■□□□ 1.47
MFSD1-203ENST00000415822 RANGAP1P46060 587 aaPredicted RBP24.24■■□□□ 1.47
MFSD1-203ENST00000415822 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
MFSD1-203ENST00000415822 KIF27Q86VH2 1401 aa24.17■■□□□ 1.46
MFSD1-203ENST00000415822 FGD5Q6ZNL6 1462 aa24.16■■□□□ 1.46
MFSD1-203ENST00000415822 CUX2O14529 1486 aa24.12■■□□□ 1.45
MFSD1-203ENST00000415822 MIER1Q8N108 512 aa24.12■■□□□ 1.45
MFSD1-203ENST00000415822 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
MFSD1-203ENST00000415822 PRXQ9BXM0 1461 aa24.08■■□□□ 1.45
MFSD1-203ENST00000415822 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
MFSD1-203ENST00000415822 CLIP1P30622 1438 aa24.06■■□□□ 1.44
MFSD1-203ENST00000415822 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
MFSD1-203ENST00000415822 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
MFSD1-203ENST00000415822 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
MFSD1-203ENST00000415822 ERICH3Q5RHP9 1530 aa23.99■■□□□ 1.43
MFSD1-203ENST00000415822 IGF1RP08069 1367 aa23.98■■□□□ 1.43
MFSD1-203ENST00000415822 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
MFSD1-203ENST00000415822 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
MFSD1-203ENST00000415822 PDS5BQ9NTI5 1447 aa23.96■■□□□ 1.43
MFSD1-203ENST00000415822 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
MFSD1-203ENST00000415822 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
MFSD1-203ENST00000415822 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
MFSD1-203ENST00000415822 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
MFSD1-203ENST00000415822 APLP2Q06481 763 aa23.82■■□□□ 1.4
MFSD1-203ENST00000415822 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms