RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 NISCHQ9Y2I1 1504 aa38.26■■■■□ 3.72
SNED1-202ENST00000342631 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
SNED1-202ENST00000342631 ABCC9O60706 1549 aa32.17■■■□□ 2.74
SNED1-202ENST00000342631 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
SNED1-202ENST00000342631 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
SNED1-202ENST00000342631 MYO15BQ96JP2 1530 aa31.63■■■□□ 2.65
SNED1-202ENST00000342631 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
SNED1-202ENST00000342631 NACADO15069 1562 aa31.53■■■□□ 2.64
SNED1-202ENST00000342631 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
SNED1-202ENST00000342631 SCRIBQ14160 1630 aa30.74■■■□□ 2.51
SNED1-202ENST00000342631 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
SNED1-202ENST00000342631 SHROOM4Q9ULL8 1493 aa30.59■■■□□ 2.49
SNED1-202ENST00000342631 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
SNED1-202ENST00000342631 PABPN1Q86U42 306 aaKnown RBP eCLIP30.17■■■□□ 2.42
SNED1-202ENST00000342631 CECR2Q9BXF3 1484 aa29.66■■■□□ 2.34
SNED1-202ENST00000342631 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
SNED1-202ENST00000342631 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
SNED1-202ENST00000342631 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
SNED1-202ENST00000342631 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
SNED1-202ENST00000342631 RSF1Q96T23 1441 aaPredicted RBP29.42■■■□□ 2.3
SNED1-202ENST00000342631 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.28
SNED1-202ENST00000342631 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
SNED1-202ENST00000342631 SUPT5HO00267 1087 aaKnown RBP29.2■■■□□ 2.26
SNED1-202ENST00000342631 WIZO95785 1651 aa29.19■■■□□ 2.26
SNED1-202ENST00000342631 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
SNED1-202ENST00000342631 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
SNED1-202ENST00000342631 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
SNED1-202ENST00000342631 HMGXB3Q12766 1538 aa29.01■■■□□ 2.23
SNED1-202ENST00000342631 BAZ1BQ9UIG0 1483 aaKnown RBP28.98■■■□□ 2.23
SNED1-202ENST00000342631 TOP2AP11388 1531 aaKnown RBP28.96■■■□□ 2.23
SNED1-202ENST00000342631 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
SNED1-202ENST00000342631 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
SNED1-202ENST00000342631 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
SNED1-202ENST00000342631 CFTRP13569 1480 aa28.25■■■□□ 2.11
SNED1-202ENST00000342631 LAMC3Q9Y6N6 1575 aa28.19■■■□□ 2.1
SNED1-202ENST00000342631 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
SNED1-202ENST00000342631 NESP48681 1621 aa28.05■■■□□ 2.08
SNED1-202ENST00000342631 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
SNED1-202ENST00000342631 FANCD2Q9BXW9 1451 aa27.91■■■□□ 2.06
SNED1-202ENST00000342631 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
SNED1-202ENST00000342631 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
SNED1-202ENST00000342631 ABCC8Q09428 1581 aa27.74■■■□□ 2.03
SNED1-202ENST00000342631 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
SNED1-202ENST00000342631 CHIC1Q5VXU3 224 aa27.73■■■□□ 2.03
SNED1-202ENST00000342631 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
SNED1-202ENST00000342631 MRC2Q9UBG0 1479 aa27.61■■■□□ 2.01
SNED1-202ENST00000342631 TOP2BQ02880 1626 aa27.61■■■□□ 2.01
SNED1-202ENST00000342631 CUX1P39880 1505 aa27.6■■■□□ 2.01
SNED1-202ENST00000342631 BIVM-ERCC5R4GMW8 1640 aa27.6■■■□□ 2.01
SNED1-202ENST00000342631 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
SNED1-202ENST00000342631 DNMBPQ6XZF7 1577 aa27.6■■■□□ 2.01
SNED1-202ENST00000342631 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
SNED1-202ENST00000342631 URB2Q14146 1524 aaKnown RBP27.56■■■□□ 2
SNED1-202ENST00000342631 TOPBP1Q92547 1522 aa27.54■■■□□ 2
SNED1-202ENST00000342631 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
SNED1-202ENST00000342631 WDR62O43379 1518 aa27.5■■□□□ 1.99
SNED1-202ENST00000342631 FGD5Q6ZNL6 1462 aa27.4■■□□□ 1.98
SNED1-202ENST00000342631 POLA1P09884 1462 aaPredicted RBP27.36■■□□□ 1.97
SNED1-202ENST00000342631 SOGA1O94964 1423 aa27.27■■□□□ 1.96
SNED1-202ENST00000342631 CUX2O14529 1486 aa27.23■■□□□ 1.95
SNED1-202ENST00000342631 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
SNED1-202ENST00000342631 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
SNED1-202ENST00000342631 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.94
SNED1-202ENST00000342631 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
SNED1-202ENST00000342631 WDR97A6NE52 1622 aa27.15■■□□□ 1.94
SNED1-202ENST00000342631 EEA1Q15075 1411 aa27.15■■□□□ 1.94
SNED1-202ENST00000342631 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
SNED1-202ENST00000342631 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
SNED1-202ENST00000342631 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
SNED1-202ENST00000342631 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
SNED1-202ENST00000342631 GAPVD1Q14C86 1478 aa26.98■■□□□ 1.91
SNED1-202ENST00000342631 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.91
SNED1-202ENST00000342631 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
SNED1-202ENST00000342631 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
SNED1-202ENST00000342631 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
SNED1-202ENST00000342631 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
SNED1-202ENST00000342631 ERICH3Q5RHP9 1530 aa26.91■■□□□ 1.9
SNED1-202ENST00000342631 IGF1RP08069 1367 aa26.89■■□□□ 1.89
SNED1-202ENST00000342631 GRIN2BQ13224 1484 aa26.87■■□□□ 1.89
SNED1-202ENST00000342631 PBRM1Q86U86 1689 aa26.86■■□□□ 1.89
SNED1-202ENST00000342631 CUL7Q14999 1698 aa26.82■■□□□ 1.88
SNED1-202ENST00000342631 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
SNED1-202ENST00000342631 KIF21BO75037 1637 aa26.77■■□□□ 1.88
SNED1-202ENST00000342631 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
SNED1-202ENST00000342631 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
SNED1-202ENST00000342631 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.87
SNED1-202ENST00000342631 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.86
SNED1-202ENST00000342631 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
SNED1-202ENST00000342631 RAPGEF2Q9Y4G8 1499 aa26.69■■□□□ 1.86
SNED1-202ENST00000342631 GOLGA3Q08378 1498 aa26.66■■□□□ 1.86
SNED1-202ENST00000342631 SYNJ2O15056 1496 aa26.61■■□□□ 1.85
SNED1-202ENST00000342631 LOC105371045A0A1W2PR82 267 aa26.55■■□□□ 1.84
SNED1-202ENST00000342631 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
SNED1-202ENST00000342631 GRIN2AQ12879 1464 aa26.52■■□□□ 1.84
SNED1-202ENST00000342631 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
SNED1-202ENST00000342631 TNIKQ9UKE5 1360 aa26.48■■□□□ 1.83
SNED1-202ENST00000342631 EHMT2Q96KQ7 1210 aa26.47■■□□□ 1.83
SNED1-202ENST00000342631 FBLN2P98095 1184 aa26.43■■□□□ 1.82
SNED1-202ENST00000342631 CHD1O14646 1710 aa26.43■■□□□ 1.82
SNED1-202ENST00000342631 CTTNBP2Q8WZ74 1663 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms