RNA–Protein interactions for RNA: ENST00000398453.7

SMAGP-202, Transcript of small cell adhesion glycoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAGP, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAGP-202ENST00000398453 NISCHQ9Y2I1 1504 aa38.17■■■■□ 3.7
SMAGP-202ENST00000398453 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
SMAGP-202ENST00000398453 ABCC9O60706 1549 aa32.16■■■□□ 2.74
SMAGP-202ENST00000398453 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
SMAGP-202ENST00000398453 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
SMAGP-202ENST00000398453 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
SMAGP-202ENST00000398453 MYO15BQ96JP2 1530 aa31.39■■■□□ 2.61
SMAGP-202ENST00000398453 NACADO15069 1562 aa31.37■■■□□ 2.61
SMAGP-202ENST00000398453 RB1CC1Q8TDY2 1594 aa31.24■■■□□ 2.59
SMAGP-202ENST00000398453 SCRIBQ14160 1630 aa30.82■■■□□ 2.52
SMAGP-202ENST00000398453 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
SMAGP-202ENST00000398453 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
SMAGP-202ENST00000398453 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
SMAGP-202ENST00000398453 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
SMAGP-202ENST00000398453 CECR2Q9BXF3 1484 aa29.68■■■□□ 2.34
SMAGP-202ENST00000398453 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
SMAGP-202ENST00000398453 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
SMAGP-202ENST00000398453 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
SMAGP-202ENST00000398453 EIF4G1Q04637 1599 aaKnown RBP29.41■■■□□ 2.3
SMAGP-202ENST00000398453 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
SMAGP-202ENST00000398453 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
SMAGP-202ENST00000398453 WIZO95785 1651 aa29.23■■■□□ 2.27
SMAGP-202ENST00000398453 PEG3Q9GZU2 1588 aa29.13■■■□□ 2.25
SMAGP-202ENST00000398453 CC2D2AQ9P2K1 1620 aa29.11■■■□□ 2.25
SMAGP-202ENST00000398453 SMARCA2P51531 1590 aa29.09■■■□□ 2.25
SMAGP-202ENST00000398453 ATAD2BQ9ULI0 1458 aa29.09■■■□□ 2.25
SMAGP-202ENST00000398453 TOP2AP11388 1531 aaKnown RBP28.94■■■□□ 2.22
SMAGP-202ENST00000398453 BAZ1BQ9UIG0 1483 aaKnown RBP28.92■■■□□ 2.22
SMAGP-202ENST00000398453 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
SMAGP-202ENST00000398453 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
SMAGP-202ENST00000398453 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
SMAGP-202ENST00000398453 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
SMAGP-202ENST00000398453 CFTRP13569 1480 aa28.13■■■□□ 2.09
SMAGP-202ENST00000398453 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
SMAGP-202ENST00000398453 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
SMAGP-202ENST00000398453 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
SMAGP-202ENST00000398453 NESP48681 1621 aa28.06■■■□□ 2.08
SMAGP-202ENST00000398453 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
SMAGP-202ENST00000398453 ABCC8Q09428 1581 aa27.84■■■□□ 2.05
SMAGP-202ENST00000398453 PDS5BQ9NTI5 1447 aa27.82■■■□□ 2.04
SMAGP-202ENST00000398453 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
SMAGP-202ENST00000398453 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
SMAGP-202ENST00000398453 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
SMAGP-202ENST00000398453 WRNQ14191 1432 aaPredicted RBP eCLIP27.69■■■□□ 2.02
SMAGP-202ENST00000398453 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
SMAGP-202ENST00000398453 ERCC6Q03468 1493 aa27.64■■■□□ 2.02
SMAGP-202ENST00000398453 CUX1P39880 1505 aa27.61■■■□□ 2.01
SMAGP-202ENST00000398453 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
SMAGP-202ENST00000398453 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
SMAGP-202ENST00000398453 TOP2BQ02880 1626 aa27.57■■■□□ 2
SMAGP-202ENST00000398453 DNMBPQ6XZF7 1577 aa27.55■■■□□ 2
SMAGP-202ENST00000398453 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
SMAGP-202ENST00000398453 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
SMAGP-202ENST00000398453 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
SMAGP-202ENST00000398453 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
SMAGP-202ENST00000398453 WDR62O43379 1518 aa27.41■■□□□ 1.98
SMAGP-202ENST00000398453 FGD5Q6ZNL6 1462 aa27.38■■□□□ 1.97
SMAGP-202ENST00000398453 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
SMAGP-202ENST00000398453 RAD54L2Q9Y4B4 1467 aa27.2■■□□□ 1.95
SMAGP-202ENST00000398453 SOGA1O94964 1423 aa27.19■■□□□ 1.94
SMAGP-202ENST00000398453 CUX2O14529 1486 aa27.16■■□□□ 1.94
SMAGP-202ENST00000398453 WDR97A6NE52 1622 aa27.16■■□□□ 1.94
SMAGP-202ENST00000398453 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
SMAGP-202ENST00000398453 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
SMAGP-202ENST00000398453 IFT140Q96RY7 1462 aa27.1■■□□□ 1.93
SMAGP-202ENST00000398453 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
SMAGP-202ENST00000398453 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
SMAGP-202ENST00000398453 EEA1Q15075 1411 aa27.05■■□□□ 1.92
SMAGP-202ENST00000398453 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
SMAGP-202ENST00000398453 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
SMAGP-202ENST00000398453 TDRD9Q8NDG6 1382 aaKnown RBP26.96■■□□□ 1.91
SMAGP-202ENST00000398453 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.9
SMAGP-202ENST00000398453 EIF4G3O43432 1585 aaKnown RBP26.92■■□□□ 1.9
SMAGP-202ENST00000398453 GAPVD1Q14C86 1478 aa26.91■■□□□ 1.9
SMAGP-202ENST00000398453 PBRM1Q86U86 1689 aa26.89■■□□□ 1.89
SMAGP-202ENST00000398453 AQRO60306 1485 aaKnown RBP eCLIP26.88■■□□□ 1.89
SMAGP-202ENST00000398453 CSRNP3Q8WYN3 585 aa26.87■■□□□ 1.89
SMAGP-202ENST00000398453 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
SMAGP-202ENST00000398453 IGF1RP08069 1367 aa26.8■■□□□ 1.88
SMAGP-202ENST00000398453 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
SMAGP-202ENST00000398453 CUL7Q14999 1698 aa26.77■■□□□ 1.88
SMAGP-202ENST00000398453 KIF21BO75037 1637 aa26.76■■□□□ 1.87
SMAGP-202ENST00000398453 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
SMAGP-202ENST00000398453 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
SMAGP-202ENST00000398453 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
SMAGP-202ENST00000398453 CARMIL1Q5VZK9 1371 aa26.69■■□□□ 1.86
SMAGP-202ENST00000398453 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
SMAGP-202ENST00000398453 GOLGA3Q08378 1498 aa26.67■■□□□ 1.86
SMAGP-202ENST00000398453 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
SMAGP-202ENST00000398453 RAPGEF2Q9Y4G8 1499 aa26.65■■□□□ 1.86
SMAGP-202ENST00000398453 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SMAGP-202ENST00000398453 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
SMAGP-202ENST00000398453 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
SMAGP-202ENST00000398453 UBTFP17480 764 aaKnown RBP26.5■■□□□ 1.83
SMAGP-202ENST00000398453 GRIN2AQ12879 1464 aa26.45■■□□□ 1.82
SMAGP-202ENST00000398453 CHD1O14646 1710 aa26.45■■□□□ 1.82
SMAGP-202ENST00000398453 TNIKQ9UKE5 1360 aa26.43■■□□□ 1.82
SMAGP-202ENST00000398453 CTTNBP2Q8WZ74 1663 aa26.42■■□□□ 1.82
SMAGP-202ENST00000398453 CHMP7Q8WUX9 453 aaPredicted RBP26.42■■□□□ 1.82
SMAGP-202ENST00000398453 FBLN2P98095 1184 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms