RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
ALMS1P1-202ENST00000450720 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
ALMS1P1-202ENST00000450720 ABCC9O60706 1549 aa33.91■■■■□ 3.02
ALMS1P1-202ENST00000450720 DCAF8L2P0C7V8 631 aa32.97■■■□□ 2.87
ALMS1P1-202ENST00000450720 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
ALMS1P1-202ENST00000450720 NACADO15069 1562 aa32.68■■■□□ 2.82
ALMS1P1-202ENST00000450720 RB1CC1Q8TDY2 1594 aa32.67■■■□□ 2.82
ALMS1P1-202ENST00000450720 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
ALMS1P1-202ENST00000450720 DCAF1Q9Y4B6 1507 aa32.52■■■□□ 2.8
ALMS1P1-202ENST00000450720 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
ALMS1P1-202ENST00000450720 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
ALMS1P1-202ENST00000450720 PABPN1Q86U42 306 aaKnown RBP eCLIP31.78■■■□□ 2.68
ALMS1P1-202ENST00000450720 BICRAQ9NZM4 1560 aa31.64■■■□□ 2.66
ALMS1P1-202ENST00000450720 SHROOM4Q9ULL8 1493 aa31.46■■■□□ 2.63
ALMS1P1-202ENST00000450720 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
ALMS1P1-202ENST00000450720 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
ALMS1P1-202ENST00000450720 CECR2Q9BXF3 1484 aa30.68■■■□□ 2.5
ALMS1P1-202ENST00000450720 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
ALMS1P1-202ENST00000450720 BAZ1AQ9NRL2 1556 aaPredicted RBP30.5■■■□□ 2.47
ALMS1P1-202ENST00000450720 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
ALMS1P1-202ENST00000450720 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
ALMS1P1-202ENST00000450720 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
ALMS1P1-202ENST00000450720 SMARCA2P51531 1590 aa30.23■■■□□ 2.43
ALMS1P1-202ENST00000450720 NCAPD3P42695 1498 aa30.16■■■□□ 2.42
ALMS1P1-202ENST00000450720 RSF1Q96T23 1441 aaPredicted RBP30.14■■■□□ 2.42
ALMS1P1-202ENST00000450720 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
ALMS1P1-202ENST00000450720 WIZO95785 1651 aa30.07■■■□□ 2.4
ALMS1P1-202ENST00000450720 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
ALMS1P1-202ENST00000450720 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
ALMS1P1-202ENST00000450720 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
ALMS1P1-202ENST00000450720 TOP2AP11388 1531 aaKnown RBP29.75■■■□□ 2.35
ALMS1P1-202ENST00000450720 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
ALMS1P1-202ENST00000450720 NESP48681 1621 aa29.41■■■□□ 2.3
ALMS1P1-202ENST00000450720 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
ALMS1P1-202ENST00000450720 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
ALMS1P1-202ENST00000450720 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
ALMS1P1-202ENST00000450720 CFTRP13569 1480 aa29.2■■■□□ 2.27
ALMS1P1-202ENST00000450720 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
ALMS1P1-202ENST00000450720 KIF21AQ7Z4S6 1674 aa29.03■■■□□ 2.24
ALMS1P1-202ENST00000450720 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
ALMS1P1-202ENST00000450720 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
ALMS1P1-202ENST00000450720 PRDM2Q13029 1718 aa28.95■■■□□ 2.23
ALMS1P1-202ENST00000450720 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
ALMS1P1-202ENST00000450720 MRC2Q9UBG0 1479 aa28.83■■■□□ 2.21
ALMS1P1-202ENST00000450720 CUX2O14529 1486 aa28.7■■■□□ 2.18
ALMS1P1-202ENST00000450720 WDR62O43379 1518 aa28.69■■■□□ 2.18
ALMS1P1-202ENST00000450720 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
ALMS1P1-202ENST00000450720 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
ALMS1P1-202ENST00000450720 ABCC8Q09428 1581 aa28.56■■■□□ 2.16
ALMS1P1-202ENST00000450720 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
ALMS1P1-202ENST00000450720 CUX1P39880 1505 aa28.48■■■□□ 2.15
ALMS1P1-202ENST00000450720 WRNQ14191 1432 aaPredicted RBP eCLIP28.44■■■□□ 2.14
ALMS1P1-202ENST00000450720 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
ALMS1P1-202ENST00000450720 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
ALMS1P1-202ENST00000450720 SYNJ1O43426 1573 aa28.33■■■□□ 2.13
ALMS1P1-202ENST00000450720 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
ALMS1P1-202ENST00000450720 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
ALMS1P1-202ENST00000450720 SOGA1O94964 1423 aa28.27■■■□□ 2.12
ALMS1P1-202ENST00000450720 BIVM-ERCC5R4GMW8 1640 aa28.26■■■□□ 2.12
ALMS1P1-202ENST00000450720 RAD54L2Q9Y4B4 1467 aa28.26■■■□□ 2.11
ALMS1P1-202ENST00000450720 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.11
ALMS1P1-202ENST00000450720 ZNF608Q9ULD9 1512 aaPredicted RBP28.19■■■□□ 2.1
ALMS1P1-202ENST00000450720 TDRD9Q8NDG6 1382 aaKnown RBP28.11■■■□□ 2.09
ALMS1P1-202ENST00000450720 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
ALMS1P1-202ENST00000450720 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
ALMS1P1-202ENST00000450720 ABCA10Q8WWZ4 1543 aa28.05■■■□□ 2.08
ALMS1P1-202ENST00000450720 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
ALMS1P1-202ENST00000450720 WDR97A6NE52 1622 aa28.02■■■□□ 2.08
ALMS1P1-202ENST00000450720 GAPVD1Q14C86 1478 aa27.94■■■□□ 2.06
ALMS1P1-202ENST00000450720 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
ALMS1P1-202ENST00000450720 GRIN2BQ13224 1484 aa27.88■■■□□ 2.05
ALMS1P1-202ENST00000450720 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
ALMS1P1-202ENST00000450720 SNAPC4Q5SXM2 1469 aa27.83■■■□□ 2.05
ALMS1P1-202ENST00000450720 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
ALMS1P1-202ENST00000450720 PBRM1Q86U86 1689 aa27.82■■■□□ 2.04
ALMS1P1-202ENST00000450720 FBLN2P98095 1184 aa27.78■■■□□ 2.04
ALMS1P1-202ENST00000450720 MAGI1Q96QZ7 1491 aaPredicted RBP27.76■■■□□ 2.03
ALMS1P1-202ENST00000450720 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
ALMS1P1-202ENST00000450720 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.03
ALMS1P1-202ENST00000450720 RUSC2Q8N2Y8 1516 aa27.67■■■□□ 2.02
ALMS1P1-202ENST00000450720 SYNJ2O15056 1496 aa27.66■■■□□ 2.02
ALMS1P1-202ENST00000450720 IGF1RP08069 1367 aa27.65■■■□□ 2.02
ALMS1P1-202ENST00000450720 OSCARQ8IYS5 282 aa27.64■■■□□ 2.02
ALMS1P1-202ENST00000450720 CHD1O14646 1710 aa27.64■■■□□ 2.02
ALMS1P1-202ENST00000450720 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
ALMS1P1-202ENST00000450720 FHAD1B1AJZ9 1412 aa27.62■■■□□ 2.01
ALMS1P1-202ENST00000450720 GRIN2AQ12879 1464 aa27.53■■■□□ 2
ALMS1P1-202ENST00000450720 CUL7Q14999 1698 aa27.53■■■□□ 2
ALMS1P1-202ENST00000450720 FAM9AQ8IZU1 332 aaPredicted RBP27.52■■■□□ 2
ALMS1P1-202ENST00000450720 CARMIL1Q5VZK9 1371 aa27.52■■■□□ 2
ALMS1P1-202ENST00000450720 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
ALMS1P1-202ENST00000450720 EEA1Q15075 1411 aa27.45■■□□□ 1.98
ALMS1P1-202ENST00000450720 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
ALMS1P1-202ENST00000450720 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
ALMS1P1-202ENST00000450720 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
ALMS1P1-202ENST00000450720 NUP160Q12769 1436 aa27.36■■□□□ 1.97
ALMS1P1-202ENST00000450720 CLASP1Q7Z460 1538 aa27.33■■□□□ 1.97
ALMS1P1-202ENST00000450720 PRXQ9BXM0 1461 aa27.32■■□□□ 1.96
ALMS1P1-202ENST00000450720 EHMT2Q96KQ7 1210 aa27.21■■□□□ 1.95
ALMS1P1-202ENST00000450720 KIAA0586Q9BVV6 1533 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms